Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1883 ATGGAAGTTGGTGGGGTTGAAGAGAGCAATGCGAGATTGGTGGAAAGTGGAAGCAATGAAGGGAGTAGCATTGAGTCAAGATGGGTTGATGGCAGTGAAGTGGATACTATGGAGGTTCCTGCATGGTCAAATGAGGGTAGAGAAGGGTATGGATCAGTGAGGAGGAGGCTTTTGAAGGGTCCCAAGAGATTGAATTCTTTGGATGTTGAAGTCATGGCCATCGCTAAGAGTCAAGATCAACACTCCAAGGATGCTTCACTTTGGCCCACTCTTGCATTAGCATTTCAGACTCTTGGCGTGGTATATGGGGACATGGGAACAAGTCCTCTCTATGTTTTTGCAGATGTCTTTAGCAAGGTTCCGATCGAGTCGGACGTTGATGTCTTGGGGGCCTTATCACTAGTAATGTACACAATAGCACTTATTCCATTGGCAAAGTATGTTTTTGTTGTTCTCAAAGCAAATGACAATGGAGAAGGAGGAACGTTTGCGCTATACTCCTTGATCTGCAGATATGCAAATGTGAATATGCTTCCGAATCGTCAACCAGCCGATGAACATATCTCTAGTTTCAGGCTCAAACTCCCCACTCCAGAAATGAAAAGGGCTTTAAACATAAAGGAGACTTTGGAGAAGAGGTCATCTTTGAAAACCTTTTTGTTATTGTTGGTTCTGCTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGGCTGCAAGGTGAAATACACGGGTTTGGTACAAATTCAGTGGTTCTTGTTTCAATAGTAGTCCTGGTAGCTTTGTTCAGCATACAGCGGTTCGGAACCAGCAAAGTTGGCTTCATGTTTGCACCTATACTTGCTTTATGGTTCTTTTGTCTTGGTTCTATTGGAATCTATAATATAGTTAAGCATGATATTATGGTTCTGAGAGCAATTAATCCGGCTTTTATTTTTTACTTCTTTAAGAAGAATGGCAAAAAGGCATGGTCAGCTCTTGGTGGTTGTGTTCTTTGTATTACAGGCGCAGAAGCAATGTTTGCTGATCTTGGTCATTTTTCGGTACGAGCGATACAGATTGCCTTTACTTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGACCAAGCTGCCTTTTTGCTGAAGAACCCTACATCATATGCAAGAGTATTTTATGACTCTGTTCCAGGAAGACTTTTCTGGCCAGTGTTTGTGATAGCCACACTTGCAGCTATGATAGCCAGCCAAGCAATGATATCGGCGACATTTTCATGCGTAAAGCAATCTATGGCTTTGGGGTGCTTTCCTCGGCTCAAGATAATTCACACCTCGAGAAAGTTCATGGGTCAAATTTACATCCCTGTAATTAACTGGTTTCTGATGGTCATGTGCATAGTTGTTGTCTCTATCTTCCAAAGCACTACTGATATTGCAAATGCTTATGGCATTGCTGAAGTTGGTGTCATGATAGTTAGCACAACCTTGGTGACACTAGTAATGCTTCTAATTTGGCAAACTAACTTGTTTTGGGCAATTTGTTTCCCAATTGCATTTGGATCGGTGGAGCTCATTTACATGTCGTCCGTCCTATCGAAAATCTTCGAGGGCGGCTGGCTTCCACTCGCCTTCGCCACCTTTTTCCTCTCCGTGATGTACACTTGGAACTACGGGAGCGTGTTGAAGTACAGAAGTGAAGTCCAGGAGAAAATTTCCTTAGACTTGATGCTTGAACTTGGATCAAATCTTGGAACGGTAAGMGTKCCGGGAATTGGATTGCTATATAATGAGCTTGTCCAAGGCATTCCTTCAGTTTTTTTRCAGTTCTTGCTGAGTCTTCCGGCCCTTCACTCGACCATAGTTTTCGTCTGCATTAAACATGTTCCTATCCCGGTTGTACCTCAAGAGGAAAGGTTTCTATTCCGAAGAGTTTGTCCGAAAGATTAYCATATGTTTCGCTGCGTCGCGAGGTATGGCTATAAAGATGTAAGGAAGGAAGATCACCATGCATTCGAGCAACTTCTCATCGAAAGTCTGGAGAAATTCTTGAGAAAAGAGGCTCAAGAAACTGCCATGGAAAGTAGTAACTTACCTGAGGAGGACATGGACAATGCATTGGTGAAATCCAAGGATTCTGATAACAATAATGTAGCTGAGGAGCTAAGGATTCCATTGATGCATGGCCAGAATAGTTYCGAAGAAACTGGAACTTCAATCACCGAGGASGCCCCGACAAGTTACATGTCATTAGATGAAGATGATGGTATTGAATATGAGCTTTCGGCACTTAGAGAAGCAACTGCATCAGGGTGCACGTATCTTCTTGGACATGGTGATGTGAGGGCCAAGAAGAACTCCTTGTTCTTCAAGAAATTGGTGATTAATTACTTCTATGCATTCCTTAGAAACAATTGCAGAGGAGGCACTGCAAATATGAGAGTGCCTCATACAAATATCATTCAAGTTGGGATGACATATATGGTCTAA 2502 0.4257 MEVGGVEESNARLVESGSNEGSSIESRWVDGSEVDTMEVPAWSNEGREGYGSVRRRLLKGPKRLNSLDVEVMAIAKSQDQHSKDASLWPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIESDVDVLGALSLVMYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRYANVNMLPNRQPADEHISSFRLKLPTPEMKRALNIKETLEKRSSLKTFLLLLVLLGTSMIIGDGILTPAISVMSAISGLQGEIHGFGTNSVVLVSIVVLVALFSIQRFGTSKVGFMFAPILALWFFCLGSIGIYNIVKHDIMVLRAINPAFIFYFFKKNGKKAWSALGGCVLCITGAEAMFADLGHFSVRAIQIAFTCVVFPCLLLAYMDQAAFLLKNPTSYARVFYDSVPGRLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMVMCIVVVSIFQSTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWQTNLFWAICFPIAFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVQEKISLDLMLELGSNLGTVXVPGIGLLYNELVQGIPSVFLQFLLSLPALHSTIVFVCIKHVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRKEAQETAMESSNLPEEDMDNALVKSKDSDNNNVAEELRIPLMHGQNSXEETGTSITEXAPTSYMSLDEDDGIEYELSALREATASGCTYLLGHGDVRAKKNSLFFKKLVINYFYAFLRNNCRGGTANMRVPHTNIIQVGMTYMV* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1883 833 PANTHER POTASSIUM TRANSPORTER 12-RELATED 21 833 - -
Amo05g1883 833 TIGRFAM kup: potassium uptake protein 93 833 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo05g1883 833 Pfam K+ potassium transporter 94 667 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo05g1883 833 MobiDBLite consensus disorder prediction 1 30 - -
Amo05g1883 833 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 833 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo05g1883 833 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1883 Amo-Chr5 39985359 39990561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1883 5 833 Inorganic Solute Cotransporters AT1G60160 73.589 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1883 K03549 - gmx:100814419 1301.96