Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1872 ATGTTGCCACCACTTGTTCTAAGTCTATATCTTATTATTCCTTTGTTTGTGTTTCTTTTCATCCGAACCCTAAAAAAAAAATCCCTTAAATCACTACCTGGTCCTAAAGGCCTTCCCATAATAGGGAACCTTCATCAATTAGATAATTCAATCCTTCACAAGCAACTATCTCAACTCTCTAAGAAATATGGCCCTATATTCTCCCTTAAACTAGGGTTAAGGCGTGCCATTGTTGTTTCCTCATCAAAACTAGCCAAAGAGACACTAAAAAACCATGACATTGTTTTCTCCGGAAGGCCTAAGTTACTAGGGCAACAAAAAATGTCCTACAATGGCTTAGATATTGCGTTTTCCCAATATGGTGATCATTGGAGAGAAGTTAGAAAGATTGGTGTTACTCATGTTCTTAGTGCTAGAAGTGTATCAAGCTTTTCCTCAATAAGAAATTTTGAGATACAAAAAATGATAGAAAAAATATCTAGTCATGCTTCATCATCATCTTCAAAAGTTGTAAACTTGAGTGAGATGTTGGTGTCTCTTAATAGCACTATTATATGTAGGAGTGCTTTTGGGAGAAGGTATGATGATAATGAAGGAGTTGAGAGGAGTAGGTTCCATGGTTTGTTCAATGAGTTACAAGCTGTTGTGGCTGCTAACTTTGTTTCGGATTATATTCCTTTCTTGGGTTGGATTGATAGASTCAATGGAATGCATAAACGTCTTGAAAGAATTTTTAAGGAGATGGATAGTTTCTATCAAGAAGTCATTGATGAACACATGGATCCCAATAGAAAGACTTTGAAGGATAAGGGAGAAGAAGACATGATTGATGTCTTGCTTCAATTGAAGAAGGAGCGTTCATTTTCCATTGACATCACCTATGATCACATCAAAGCATTGGTCATGGATATGCTTGTAGCGGCAACAGACACTACTTCAGCCACAACTGTTTGGGCTATGTTTGCCCTAATGAAAAACCCAAGAGTTCTAAAGAAAGTTCAAGAAGAAATTAGAAAGCAAGAAATCAAGAAAGATTATTTAGAAGAAGATGATATTCAAAAGTTTACCTATTTTAATGCTGTTATAAAAGAGGTACTTAGGTTGCATCTTCCAGCACCACTCCTTGTGCCAAGAGAAACAACTCAACATTGCATTATAGATGGCTATGAAATTCCAGCCAAGACAATAGTGTATATAAATGCATGGGCTATACATAGAGATCCCGAAATTTGGAAGGATCCGGAAGAGTTCTATCCTGAAAGGTTCCTCGAAAATCATATTGATTTTCGAGGGCAAGATTTCGAGTTGATTCCGTTTGGTTCCGGTAGAAGAATTTGCCCTGGATTGCATATGGCAGTTACAACACTTGACCTAATCCTTGCTAATCTTTTATATTCTTTTAACTGGGAATTGCCTTTGGGAGTGACAAAGGAAGACATTGATACTGAAGTATTGCCTGGACTTGTTCCACATAAGAAGAATCCTCTTTGCCTTGTTGCAAACAGCCACATATAG 1515 0.371 MLPPLVLSLYLIIPLFVFLFIRTLKKKSLKSLPGPKGLPIIGNLHQLDNSILHKQLSQLSKKYGPIFSLKLGLRRAIVVSSSKLAKETLKNHDIVFSGRPKLLGQQKMSYNGLDIAFSQYGDHWREVRKIGVTHVLSARSVSSFSSIRNFEIQKMIEKISSHASSSSSKVVNLSEMLVSLNSTIICRSAFGRRYDDNEGVERSRFHGLFNELQAVVAANFVSDYIPFLGWIDRXNGMHKRLERIFKEMDSFYQEVIDEHMDPNRKTLKDKGEEDMIDVLLQLKKERSFSIDITYDHIKALVMDMLVAATDTTSATTVWAMFALMKNPRVLKKVQEEIRKQEIKKDYLEEDDIQKFTYFNAVIKEVLRLHLPAPLLVPRETTQHCIIDGYEIPAKTIVYINAWAIHRDPEIWKDPEEFYPERFLENHIDFRGQDFELIPFGSGRRICPGLHMAVTTLDLILANLLYSFNWELPLGVTKEDIDTEVLPGLVPHKKNPLCLVANSHI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1872 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PANTHER CYTOCHROME P450 71B11-RELATED 5 502 - -
Amo05g1872 504 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 502 - -
Amo05g1872 504 Coils Coil 330 350 - -
Amo05g1872 504 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1872 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Amo05g1872 504 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1872 Amo-Chr5 39632645 39634660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1872 5 504 Cytochrome P450 AT4G31500 46.123 8.58e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1872 - - gmx:100800236 688.723