Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1862 ATGGAAAAAATTGAAGTTGAAATTATTTCTAGAGAAAACATTAGACCTTCTTCCCCCACACTCTCTCCCTTAAGAACCTTCAAATACTCCATTTTAGATCAACTTGTTCCCTTTCCTCATGCAGTAGCCATCCTATTCTACACCTCACAAAATTTGTCTGAATTCCCAAAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACTATTTTATCCTCTTGCTGGAAAGACCAAAGATGATTTCTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCAAAAGTGAATTGTCCTATTTCAAAGTTTCTAAGGAAGCCTGATTTGAATTCGCTGAACATGCTTTTTCCAATTACTCCATACTTGGAGGAAACAACGACAGGAGCTCATGTGACTAACATTCAAGTTAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCATTTCTCATAAGATCATTGATGGTGAATCAGTTAACACCTTCCTGAAGGTGTGGACAGAAAGAGCCGACACCACACGCAATTCAAAACCTTTGACAGAACCAAACTTTGCTACAAGTTCGTATTTCCCTACAAGTACTTTTTATTTCAGAGACTTGTCAAAGAAAAGCTGGGGTTCCCTTCTTAAGGAAGAAAAATGGGTCACAAGGAGGATTTTGTTCAAAAATTCAACTATTGCCACCCTCAAGGCTCAAATAGTGGCAAAATCTTCAACTACACGTGTTCAGATACTTTCTGCATTGTTGTGGAAGTGTTTCATGGCCGCTTCAAAGGCTCAATTTGGAATTCAAAGGCCTTCTATGGTGATTAACACAGTGAACCTTCGCCGAAAAATGGAAGAGTCTCTACATCCTGAGAATTCTATAGGAAATTTTTTGTGGTTTACAACTTCAGAACACATGAGTGAGCATGAGGTGAGTTTGGATGAGTTGGTGAGCAAACTGAAGAAGTCAGTTGAAGAAGTTGATAAGGATTTTATTGCAAGATTGCAAAGTGAAAAGGAGGGGAGTTCAATCATGGAAAATGCTCTAAGAAGAATTAGTGGTGAAACATGGTCTAATAATAAAGGTGACGAGGCATTATTGGAAAGTTTAGCTTTTAATAGTTGGATTAACTTTGGAGGCTATGATGCTGATTTTGGATGGGGAAAACCTAGATGGGCGAGTAGTGTTGGTAAAGAAGGTAATTTACTGTTACTGAATAAGATAATTTTGGTTGATACTAACTCCAAAGATGGTATAGAAGCTTGGGTTACCTTGGAAGAGGAGAAAATGAAGCATTTGGTTTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGCCCTTTGCCAGATAGCTCAAAATTATAG 1371 0.3771 MEKIEVEIISRENIRPSSPTLSPLRTFKYSILDQLVPFPHAVAILFYTSQNLSEFPKRLELLKQSLSETLTLFYPLAGKTKDDFSIDCNDEGANFVVAKVNCPISKFLRKPDLNSLNMLFPITPYLEETTTGAHVTNIQVNVFDCGGIAIGFCISHKIIDGESVNTFLKVWTERADTTRNSKPLTEPNFATSSYFPTSTFYFRDLSKKSWGSLLKEEKWVTRRILFKNSTIATLKAQIVAKSSTTRVQILSALLWKCFMAASKAQFGIQRPSMVINTVNLRRKMEESLHPENSIGNFLWFTTSEHMSEHEVSLDELVSKLKKSVEEVDKDFIARLQSEKEGSSIMENALRRISGETWSNNKGDEALLESLAFNSWINFGGYDADFGWGKPRWASSVGKEGNLLLLNKIILVDTNSKDGIEAWVTLEEEKMKHLVSSTELLTYATLDPSPLPDSSKL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1862 456 Gene3D - 216 442 IPR023213 -
Amo05g1862 456 PANTHER F21J9.9 6 450 - -
Amo05g1862 456 Gene3D - 3 202 IPR023213 -
Amo05g1862 456 Pfam Transferase family 5 439 - -
Amo05g1862 456 PANTHER VINORINE SYNTHASE-LIKE 6 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1862 Amo-Chr5 39143755 39145125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1862 4 431 Monolignol Biosynthesis Gene Families AT5G48930 24.672 5.49e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1862 - - aip:107628104 675.626