Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1861 ATGGAAGAAGTTAAAGTTGAAATCATTTCTAAAGAAAATATTAAACCTTCATCTCCCACACCCTCTCACTTAAAAACCTTCAAACACTCCTTTTTAGATCAACTTGTTCCTTTTCCTCATGCAACAATCATCCTATTCTACACCTCACAAAATCCCTTTGAATTTTCTGAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTTTTGCTGGAAAGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGTCAAAGTGAATTGTTCTATTTCAAAGTTTCTAAAAAAGCCTGATTTGAATTCATTGAACAAGTTTATTCCAACTACTCCAAACTTTGAAAAAACAATGACAGGAGCTCATGTGATTAACATTCAAGTTAATATCTTTGATTGTGGTGGAATTGCAATTGGATTTCGCATTTCTCATAGGATCGCTGATGGTGATTCAATTGACACCTTCCTGAAGGCATGGACAGAAAGAGCCGGCTACAACTGCAATTCAGAACTTTTGACAGAACCAAACTTTGCTACAAGTTCTCTGTTCCCTACAAGTACTTCACATTTCAGAAACTTGTCAAGGAAAACATGGGGTTCCATTTTTAGGAAAGAAAAATGGGTCACAAGGAGGTTTTTGTTCAAAAATTCAGCTATTGCTACCCTCAAGGCTCAAATAGTGGCAACATCTTCATCTGACCCATTGAAGAATCCTCCTAATACTCCTTCACGTGTTCAGACAGTTTCTGCATTGTTCTGGAAGTATTTCATGGCCGCATCCAAGGATCAATTTGGAACTCAAAGTCCTTCTATACTGATTAACACGGTGAACCTTCGCCGAAGAATGCCAGAGTCTCTACATCCTGAGAATTCTATAGGGAATTTTCTATGGTTGGCAACTTCAGAACACACGAGTGAGCATGAGCTGAATTTGAATGAGTTAGTGAATAAAGTGAAGAAGTCAATTGAAGAAGTTGATAAGGATTTTGTTGCAAGGTTGCAAAGTGAAGAGGAAGGGAGTTCAATCATGGAAAATGCTCTTAGGAAAATTAGCGGTGAAACATGGTCTGATAATAAGGGTGATAAGGCATTGGAAATATTAGCTATTAGTAGTTGGTGTAACTTTGGATTCTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGGTGAGTAGTATTGGTATAGAAAGTATTTCAGTGTTAACGAATATGTTAATCTTGGTTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGATTACCTTGGATGAAGAGAAAATGAAGCTTTTGATGTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGTCCTTTGACAGGGTCTAACTCAGGCTTGCAGGCTTGA 1407 0.3724 MEEVKVEIISKENIKPSSPTPSHLKTFKHSFLDQLVPFPHATIILFYTSQNPFEFSERLELLKQSLSETLTQFYPFAGKIKDDLSIDCNDEGANFVVVKVNCSISKFLKKPDLNSLNKFIPTTPNFEKTMTGAHVINIQVNIFDCGGIAIGFRISHRIADGDSIDTFLKAWTERAGYNCNSELLTEPNFATSSLFPTSTSHFRNLSRKTWGSIFRKEKWVTRRFLFKNSAIATLKAQIVATSSSDPLKNPPNTPSRVQTVSALFWKYFMAASKDQFGTQSPSILINTVNLRRRMPESLHPENSIGNFLWLATSEHTSEHELNLNELVNKVKKSIEEVDKDFVARLQSEEEGSSIMENALRKISGETWSDNKGDKALEILAISSWCNFGFYDADFGWGKPMWVSSIGIESISVLTNMLILVDTKFKDGIEAWITLDEEKMKLLMSSTELLTYATLDPSPLTGSNSGLQA* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1861 468 Pfam Transferase family 5 448 - -
Amo05g1861 468 PANTHER F21J9.9 6 460 - -
Amo05g1861 468 PANTHER VINORINE SYNTHASE-LIKE 6 460 - -
Amo05g1861 468 Gene3D - 216 451 IPR023213 -
Amo05g1861 468 Gene3D - 3 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1861 Amo-Chr5 39116076 39117566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1861 4 442 Monolignol Biosynthesis Gene Families AT5G48930 24.454 1.72e-23 100