Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1860 TTTCAAGGACACGGTGACACAAACATACATAAAATATATAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTCTTGCTGGAAGGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCCAAAGTGAATTGTCCTATTACAAAGTTTCTAGAGAAGCCTGATTTGAAATCATTGAATGAGCTTCTTGCAACTACTCCATACTCTGAAGAACCAATGATAGGAGCTCATGTGACTAACATTCAAGTCAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCGTTTCTCATAGGATCTTTGATGCTAATTCATTGAACACCTTCACTAAGGTGTGGATAGAAAGAGCCACCAGCTGCAACCGAAATTCAAAACCTTTGACAGAACCCAACTTTGCTATAAGTTCTCTGTTCCCAACAAGTACTTTACATTTCAGAGACTTCTCAAAGAAAATCTGGGGTTCCTTTTTGAAGGAAGAAAAATGGGRCACAAGYAGGATTAATCATCTTAARACTCCTACACGTGTTCAGATAGTTTATGCATTGTTGTGGAAGTGTTTCATGGCTGCATCAAAGGCTCAATTTGGAACTCAAAGGCCTTCTATGGTGATTAACACGGTGAATCTTCGTCGAAGAATGGAAAAATCTCTACGTCCTGAGAATGCTATAGGAAATTTTMTGTGGTTYACAACTTTAGAACACATGAGTAGTGAGCATGAGTTGAGTTTGGATGAGTTGGTGAGTAAATTAAAGAAGTCAAATGAAGAAATTGATAAGGATTTTGTTGCAAGATTGCAAAGTGAAGAAGAAGGGAGTTCAATAATGGAAAATGCTCTTAGGAGAATTAGTGGTGAAACATGGTCTAATAATAATGAGGGTGATGATGAGGCATTAGAAACCTTATGGTTTAATAGTTGGTGTAATTTTGAAGGTTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGCTGAGTAGTGTTGGTGTAAAAGATAATTCAATGTTAGCCAATAAGATAATTTTGGTTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGACTACCTTGGATGAGGAGAAAATGAAGCATTTGGTTTCAAGCACTGAATTACTCACTTATGCAACTGTTGATCCAAGTCCTTTAGCAGTGGCTAGCTCAAAATTATAG 1209 0.3656 FQGHGDTNIHKIYRLELLKQSLSETLTQFYPLAGRIKDDLSIDCNDEGANFVVAKVNCPITKFLEKPDLKSLNELLATTPYSEEPMIGAHVTNIQVNVFDCGGIAIGFCVSHRIFDANSLNTFTKVWIERATSCNRNSKPLTEPNFAISSLFPTSTLHFRDFSKKIWGSFLKEEKWXTSRINHLKTPTRVQIVYALLWKCFMAASKAQFGTQRPSMVINTVNLRRRMEKSLRPENAIGNFXWFTTLEHMSSEHELSLDELVSKLKKSNEEIDKDFVARLQSEEEGSSIMENALRRISGETWSNNNEGDDEALETLWFNSWCNFEGYDADFGWGKPMWLSSVGVKDNSMLANKIILVDTKFKDGIEAWTTLDEEKMKHLVSSTELLTYATVDPSPLAVASSKL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1860 402 Gene3D - 169 387 IPR023213 -
Amo05g1860 402 Gene3D - 1 159 IPR023213 -
Amo05g1860 402 PANTHER F21J9.9 13 395 - -
Amo05g1860 402 Pfam Transferase family 15 384 - -
Amo05g1860 402 PANTHER VINORINE SYNTHASE-LIKE 13 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1860 Amo-Chr5 39103455 39105476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1860 7 343 Monolignol Biosynthesis Gene Families AT5G48930 24.533 4.19e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1860 - - ahf:112729054 766.148