Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1848 ATGAATGTCCTCGACGTTCATTATCACAGTTCACAGTTCATCACTTTCTCGAACGAATTAATGGCGACGCGAGTGGGAGTTAGCATAACCGCCGCAATGATCTCAGTTCAGTTCTTGGAGGTGGGATTGAACACTCTGGTGAAATCCGCCAATACCAATGGAATGAGCAACTATGTCTTCATTCTTTACTCCAACCTTCTCGCACTCTTCTTCCTTCTCCCGTCCACTTTCTTCTTTTACAGAAATGCCCCTCCTCCTCCTCCTATCCCCACCTCTGTCCTCTCTAGAATTTTACTCCTTAGTTGTCTCAGTACTACAGTGCAGACCCTGATGTACACCGGTATTGGATACAGTTCTCCTACTCTGGCCTCTGCCATGGTGGATCTTATCCCTGCTTTCACTTTCATTATTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAGTGGTTTCCATTGCAGGGGCATTAATCGTTACCTTATATAAAGGGATGCCAATAACATTAAGTGGTACTAGTGGTTCCTTGCCAAATAAAATTGGAACTAATTATCTCTCAGCAGAAGCAAACTCAAACTGGATTCTTGGTGGTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCAATCTTGTTTGTTGTTCAGACATGGATTATCAAGGATTATCCTGAAGAATTTGTAGTAACAACGACAGCTTGCGGTTTTGTTGTAGTCCTCTCCGCCATAGTAGCCTTGTTTGCAGAGCATAATAAAAAAGCTTGGATACTTAAGCCTGATATGGAATTGGTATCCATATTTTATTCGGCAATTTTTGTGGTATCAATACGAAGCGTGGTGACAACATGGGCATGCCGTAAGAAAGGGCCAGTGTATGTAGCCATGTTCAATCCTTTAGCAATGGTCGTTGCTATTGCTATGGGTATAACATTTCTTGGTGACACTCTTTATCTTGGAAGCGTGATTGGTGCTGTTGCAATAGCTATAGGATTCTATTCTGTGATGTGGGCAATGGCTCAAGAGGAAAATATGGTAGTAAAAAACAATGAATTTGTTCCATCTTCAACAGCACCTCTGTTGCCCAAAAAGAACACGGATTGTACATAA 1134 0.4171 MNVLDVHYHSSQFITFSNELMATRVGVSITAAMISVQFLEVGLNTLVKSANTNGMSNYVFILYSNLLALFFLLPSTFFFYRNAPPPPPIPTSVLSRILLLSCLSTTVQTLMYTGIGYSSPTLASAMVDLIPAFTFIIAIFSRMENLNMKRHSSYAKIIGTVVSIAGALIVTLYKGMPITLSGTSGSLPNKIGTNYLSAEANSNWILGGFLLATASFCLSILFVVQTWIIKDYPEEFVVTTTACGFVVVLSAIVALFAEHNKKAWILKPDMELVSIFYSAIFVVSIRSVVTTWACRKKGPVYVAMFNPLAMVVAIAMGITFLGDTLYLGSVIGAVAIAIGFYSVMWAMAQEENMVVKNNEFVPSSTAPLLPKKNTDCT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1848 377 PANTHER WAT1-RELATED PROTEIN 36 349 - -
Amo05g1848 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 65 174 - -
Amo05g1848 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 345 - -
Amo05g1848 377 PANTHER WAT1-RELATED PROTEIN 36 349 IPR030184 GO:0016021|GO:0022857
Amo05g1848 377 Pfam EamA-like transporter family 41 171 IPR000620 GO:0016020|GO:0016021
Amo05g1848 377 Pfam EamA-like transporter family 207 344 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1848 Amo-Chr5 38534869 38538547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1848 32 359 Nodulin-like Gene Family AT3G28050 46.809 2.97e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1848 - - gmx:100793168 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1848 05 38534869 38538547 Amo15g0121 15 4621561 4625109 hybridization