Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1847 ATGGTGATGGTTGTTATGTCACAGAGTGGGGGAATGGTGATAAACAAAGCCGCTATGAGTGATGGAATGAATAAGTATGTCATGCTTCTCTATTCTTACGTCATCTCCACCTTCCTCCTCCTCCCCTTTCCAATCCTTCACTACTTCAGATCTGATGAACGTACTACTACGCTCACGTTCTCCTCACTATGGAGCTTCTTTTTGCTTGGTTTGATCGGATGCTCAGGGCAGATATTGAGTTACGTTGGCATAGAACTTAGCTCACCGACTCTTGCTTCCGCCATGCTTAACCTCATACCTGCTTTCACTTTTCTACTAGCTCTTATTTTCAGGATGGAAGAAGCATGTTGGAGAGATTTGAGGACTCAAGCTAAAGTGTTAGGCACTGCAGTGTCAATTGGAGGAGCATTTGTTGTGATATTTTTCAAGGGTCCAGCAATCTTGAATAATACACAGTCCACCACACTCTCACTTCAATTTTCACAGCAAGTGAATTGGATCTTAGGAGGATTCTTCTGTGCTTGTGATTCTTTCTTAGGTGCCCTTTGGTATATTTATCAGACTTCAATTGCAACGAAATGCCCTGAATTAATGGTGATGGTGTTCTTCCAGAGCTTATTTTCAACGTTGGAGTGTGCATTATTTGCGTTGTTTGCGGTTAGAGATGCAGAGGCATGGTTGCTCAAGCTTCATACAGGTTGGCTTGCCATGCTATATCAGGGAATAGGCGCAAACGTGATACGGTTCATCTTATTGACATGGTGCGTGAGACGAGCAGGGCCTCTGTTTTGCTCCATGTTTAAGCCAGTGGGAATCATCTTCACTGTTTTCATGGGTGCAATCTTCTTGGGGGATCATTTTTACCTTGGAAGTTTGGTTGGTGCGGTTATAATTGTAGCAGGGTTTTATGTTGTGATGTGGGGAAAGGCTGCTCAAGAGGACAAGATTGACATTCATTACTTGGAATCAGCATCTTGTAATAATAATGTTCCCCTCTTGCAAAAAAACACCGCAGAGCAGAGAGAAATTACAGAATCAATGAAGATTCCAGGAGTGACAACACTAATGGTAACAGTTCAGTGCTTGGAAGTGGGTTTGAACACATTAATCAAAGAAGCCACAGCCAAAGGAATGAGTGACTTTGTTTTCGTTGTGTATTCAAATGCCATGGCCCTCTGTTTCCTTCTACCTTCTGCCTTTATCTATTACAGCTGTTGTGAACAGACGTTGATGTATACTGGTATTGGATATAGCTCTCCTACATTGGCTTCAGCTATGGTGGATCTCACTCCAGCTTTTACCTATATTGTTGCTCTCATTTCCCGTCACCGTGGTCCGCCGCATAACATCGTCGTCTCGGGTGAAAACTTAATTCCTGAACCATCGGATTGGGTGCTCGGAGGCTTCCTTCTTTCGGCCGGCAGCTTCTGTCTTTCGCTCGTCTTCATTGTCAAGACATGGATTATCAAGGATTACCCTGAAGAGTTAATGGTAGCAACAATTTCTTGTAGTTTTGTGATCATCCTTTCAAGTATAGTAGCTCTCATTGTTGACTCAAGTGCACAAGCATGGTTGCTCAAACCTGACACAGAGTTGATAGCTATAGGAATATTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTAGAAAAAGAGGACCTGTGTATGTTGCTATGTTCAATCCTTTGGGGATGGTAATTTCACTTGCCATGGGGGTCACATTTCTTAAGGACACGCTCTATCTAGGAAGCATAATTGGAGCTGGTGTTATAGCTCTTGGGTTTTATGGCGTGATATGGGGGCAGGATCAAGAAGAAAAGATGGTAGATGAGAAAAATAATGGAAGATGTGACTCTGTGTCATCATCTTCTTCTACGGCTCCTTTGTTGCAAAACAAGAGCATTCATGTATAG 1920 0.4286 MVMVVMSQSGGMVINKAAMSDGMNKYVMLLYSYVISTFLLLPFPILHYFRSDERTTTLTFSSLWSFFLLGLIGCSGQILSYVGIELSSPTLASAMLNLIPAFTFLLALIFRMEEACWRDLRTQAKVLGTAVSIGGAFVVIFFKGPAILNNTQSTTLSLQFSQQVNWILGGFFCACDSFLGALWYIYQTSIATKCPELMVMVFFQSLFSTLECALFALFAVRDAEAWLLKLHTGWLAMLYQGIGANVIRFILLTWCVRRAGPLFCSMFKPVGIIFTVFMGAIFLGDHFYLGSLVGAVIIVAGFYVVMWGKAAQEDKIDIHYLESASCNNNVPLLQKNTAEQREITESMKIPGVTTLMVTVQCLEVGLNTLIKEATAKGMSDFVFVVYSNAMALCFLLPSAFIYYSCCEQTLMYTGIGYSSPTLASAMVDLTPAFTYIVALISRHRGPPHNIVVSGENLIPEPSDWVLGGFLLSAGSFCLSLVFIVKTWIIKDYPEELMVATISCSFVIILSSIVALIVDSSAQAWLLKPDTELIAIGIFVVSLRSIVHIWACRKRGPVYVAMFNPLGMVISLAMGVTFLKDTLYLGSIIGAGVIALGFYGVIWGQDQEEKMVDEKNNGRCDSVSSSSSTAPLLQNKSIHV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1847 639 Pfam EamA-like transporter family 169 306 IPR000620 GO:0016020|GO:0016021
Amo05g1847 639 Pfam EamA-like transporter family 467 601 IPR000620 GO:0016020|GO:0016021
Amo05g1847 639 Pfam EamA-like transporter family 5 140 IPR000620 GO:0016020|GO:0016021
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 456 626 IPR030184 GO:0016021|GO:0022857
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 2 323 IPR030184 GO:0016021|GO:0022857
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 355 442 IPR030184 GO:0016021|GO:0022857
Amo05g1847 639 MobiDBLite consensus disorder prediction 617 639 - -
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 456 626 - -
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 2 323 - -
Amo05g1847 639 MobiDBLite consensus disorder prediction 615 639 - -
Amo05g1847 639 SUPERFAMILY Multidrug resistance efflux transporter EmrE 508 605 - -
Amo05g1847 639 PANTHER WAT1-RELATED PROTEIN 355 442 - -
Amo05g1847 639 SUPERFAMILY Multidrug resistance efflux transporter EmrE 33 143 - -
Amo05g1847 639 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1847 Amo-Chr5 38477514 38485961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1847 356 610 Nodulin-like Gene Family AT5G40240 33.750 2.61e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1847 - - pper:18791117 524.242