Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1844 ATGGCGACGCGAGTGGGAGTGAGCATAACCGCCGCAATGATCTCAGTTCAGTTCTTGGAGGTGGGATTGAACACTCTGGTGAAATCCGCCAATACCAATGGAATGAGCAACTATGTCTTCATTCTTTACTCCAACCTCGCTCGCTTCTTCTTCCTTCTCCCGTCCACTTTCTTCTTTTACAGAAATGCCCCTCCTCCTCCTCCTATACCCACCTCTGTCCTCTCTAGAATTTTACTCCTTAGTTGTCTCAGTACTACGGTGCAGACCCTGATGTACACCGGTATTGGATACAGTTCTCCTACTCTGGCCTCTGCCATGGTGGATCTTATCCCTGCTTTCACTTTCATTATTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAGTGGTTTCCATTGCAGGGGCATTAATCGTTACCTTATATAAAGGGTTGCCAATAACATTAAGTGGTACTAGTGGTTCCTTGCCAAATAAAATTGGAACTAATTATCTCTCAGCAGAAGCAAACTCAAACTGGATTCTAGGTGGTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCAATCTTGATTGTTGTTCAGACATGGATTATCAAGGATTATCCTGAAGAATTTGTAGTAACAACGACAGCTTGCGGTTTTGTTGTAGTCCTCTCCGCCATAGTAGCCTTGTTTGCAGAGCATAATAAAAAAGCTTGGATACTTAAGCCTGATATGGAATTGGTATCCATATTTTATTCGGCAATTTTTGTGGTATCAATACGAAGCGTGGTGACAACATGGGCATGCCGTAAGAAAGGGCCAGTGTATGTAGCCATGTTCAATCCTTTAGCAATGGTCGTTGCTATTGCTATGGGTATAACATTTCTTGGTGACACTCTTTATCTTGGAAGCGTGATTGGTGCTGTTGCAATAGCTATAGGATTCTATTCTGTGATGTGGGCAATGGCTCAAGAGGAAAATATGGTAAAAAACAATCAATTTGTTCCATCTTCAACAGCACCTCTGTTGCCCAGAAAGAGCACGGATTGTACATAA 1071 0.423 MATRVGVSITAAMISVQFLEVGLNTLVKSANTNGMSNYVFILYSNLARFFFLLPSTFFFYRNAPPPPPIPTSVLSRILLLSCLSTTVQTLMYTGIGYSSPTLASAMVDLIPAFTFIIAIFSRMENLNMKRHSSYAKIIGTVVSIAGALIVTLYKGLPITLSGTSGSLPNKIGTNYLSAEANSNWILGGFLLATASFCLSILIVVQTWIIKDYPEEFVVTTTACGFVVVLSAIVALFAEHNKKAWILKPDMELVSIFYSAIFVVSIRSVVTTWACRKKGPVYVAMFNPLAMVVAIAMGITFLGDTLYLGSVIGAVAIAIGFYSVMWAMAQEENMVKNNQFVPSSTAPLLPRKSTDCT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1844 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 325 - -
Amo05g1844 356 PANTHER WAT1-RELATED PROTEIN 16 329 IPR030184 GO:0016021|GO:0022857
Amo05g1844 356 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Amo05g1844 356 Pfam EamA-like transporter family 21 151 IPR000620 GO:0016020|GO:0016021
Amo05g1844 356 PANTHER WAT1-RELATED PROTEIN 16 329 - -
Amo05g1844 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1844 Amo-Chr5 38450814 38454296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1844 12 338 Nodulin-like Gene Family AT3G28050 46.037 3.57e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1844 - - gmx:100793168 448.743