Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1843 ATGGTGAACAAAAATGTGCTCCCATTTGTGGGAATGGTGATGGTTGTTATGTCACAGAGTGGGGGAATGGTGATAAACAAAGCCGCTATGAGTGATGGAATGAATAAGTATGTCATGCTTCTCTATTCTTACGTCATCTCCACCTTCCTGCTCCTCCCCTTTCCAATCCTTCACTACTTCAGATCTGATGAGCGTACTACTACGCTCACGTTCTCCTCACTATGGAGCTTCTTTTTGCTTGGTTTGATTGGATGCTCAGGGCAGATATTGAGTTATGTTGGCATAGAACTTAGCTCACCGACTCTTGCTTCCGCCATGCTTAACCTCATACCTGCTTTCACTTTTCTACTAGCTCTTATTTTCAGGATGGAAGAAGCATGTTGGAGAGATTTGAGGACTCAAGCTAAAGTGTTAGGCACTGCAGTGTCAATTGGAGGAGCATTTGTTGTGATATTTTTCAAGGGTCCAGCAATCTTGAATAATACACAGTCCACCACACTCTCACTTCAATTTTCACAGCAAGTGAATTGGATCTTAGGAGGATTCTTCTGTGCTTGTGATTCTTTCTTAGGTGCCCTTTGGTATATTTATCAGACTTCAATTGCAACGAAATGCCCTGAATTAATGGTGATGGTGTTCTTCCAGAGCTTATTTTCAACGTTGGAGTGTGCATTATTTGCGTTGTTTGCGGTTAGAGATGCAGAGGCATGGTTGCTCAAGCTTCATACAGGTTGGCTTGCCATGCTATATCAGGGAATAGGCGCAAACGTGATACGGTTCATCTTATTGACATGGTGCGTGAGACGAGCAGGGCCTCTGTTTTGCTCCATGTTTAAGCCAGTGGGAATCATCTTCACTGTTTTCATGGGTGCAATCTTCTTGGGGGATCATTTTTACCTTGGAAGTTTGGTTGGTGCGGTTATAATTGTAGCAGGGTTTTATGTTGTGATGTGGGGAAAGGCTGCTCAAGAGGACAAGATTGACATTCATTACTTGGAATCAGCATCTTGTAATAATAATGTTCCCCTCTTGCAAAAAAACACCGCAGAGCAGAGAGAAATTACAGAATCAATGAAGATTCCAGGAGTGACAACACTAATGGTAACAGTTCAGTGCTTGGAAGTGGGTTTGAACACATTAATCAAAGAAGCCACAGCCAAAGGAATGAGTGACTTTGTTTTCGTTGTGTATTCAAATGCCATGGCCCTCTGTTTCCTTCTACCTTCTGCCTTTATCTATTACAGCTGTTGTGAACAGACGTTGATGTATACTGGTATTGGATATAGCTCTCCTACATTGGCTTCAGCTATGGTGGATCTCACTCCAGCTTTTACCTATATTGTTGCTCTCATTTCCCGTCACCGTGGTCCGCCGCATAACATCGTCGTCTCGGGTGAAAACTTAATTCCTGAACCATCGGATTGGGTGCTCGGAGGCTTCCTTCTTTCGGCCGGCAGCTTCTGTCTTTCGCTCGTCTTCATTGTCAAGACATGGATTATCAAGGATTACCCTGAAGAGTTAATGGTAGCAACAATTTCTTGTAGTTTTGTGATCATCCTTTCAAGTATAGTAGCTCTCATTGTTGACTCAAGTGCACAAGCATGGTTGCTCAAACCTGACACAGAGTTGATAGCTATAGGAATATTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTAGAAAAAGAGGACCTGTGTATGTTGCTATGTTCAATCCTTTGGGGATGGTAATTTCACTTGCCATGGGGGTCACATTTCTTAAGGACACGCTCTATCTAGGAAGCATAATTGGAGCTGGTGTTATAGCTCTTGGGTTTTATGGCGTGATATGGGGGCAGGATCAAGAAGAAAAGATGGTAGATGAGAAAAATAATGGAAGATGTGACTCTGTGTCATCATCTTCTTCTACGGCTCCTTTGTTGCAAAACAAGAGCATTCATGTATAG 1953 0.4281 MVNKNVLPFVGMVMVVMSQSGGMVINKAAMSDGMNKYVMLLYSYVISTFLLLPFPILHYFRSDERTTTLTFSSLWSFFLLGLIGCSGQILSYVGIELSSPTLASAMLNLIPAFTFLLALIFRMEEACWRDLRTQAKVLGTAVSIGGAFVVIFFKGPAILNNTQSTTLSLQFSQQVNWILGGFFCACDSFLGALWYIYQTSIATKCPELMVMVFFQSLFSTLECALFALFAVRDAEAWLLKLHTGWLAMLYQGIGANVIRFILLTWCVRRAGPLFCSMFKPVGIIFTVFMGAIFLGDHFYLGSLVGAVIIVAGFYVVMWGKAAQEDKIDIHYLESASCNNNVPLLQKNTAEQREITESMKIPGVTTLMVTVQCLEVGLNTLIKEATAKGMSDFVFVVYSNAMALCFLLPSAFIYYSCCEQTLMYTGIGYSSPTLASAMVDLTPAFTYIVALISRHRGPPHNIVVSGENLIPEPSDWVLGGFLLSAGSFCLSLVFIVKTWIIKDYPEELMVATISCSFVIILSSIVALIVDSSAQAWLLKPDTELIAIGIFVVSLRSIVHIWACRKRGPVYVAMFNPLGMVISLAMGVTFLKDTLYLGSIIGAGVIALGFYGVIWGQDQEEKMVDEKNNGRCDSVSSSSSTAPLLQNKSIHV* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1843 650 MobiDBLite consensus disorder prediction 626 650 - -
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 366 453 - -
Amo05g1843 650 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 321 - -
Amo05g1843 650 Pfam EamA-like transporter family 478 612 IPR000620 GO:0016020|GO:0016021
Amo05g1843 650 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020|GO:0016021
Amo05g1843 650 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020|GO:0016021
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016021|GO:0022857
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 467 637 IPR030184 GO:0016021|GO:0022857
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 366 453 IPR030184 GO:0016021|GO:0022857
Amo05g1843 650 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Amo05g1843 650 MobiDBLite consensus disorder prediction 628 650 - -
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 7 334 - -
Amo05g1843 650 PANTHER WAT1-RELATED PROTEIN 467 637 - -
Amo05g1843 650 SUPERFAMILY Multidrug resistance efflux transporter EmrE 519 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1843 Amo-Chr5 38439008 38446333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1843 367 621 Nodulin-like Gene Family AT5G40240 33.750 2.44e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1843 - - pper:18791117 531.176