Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1832 ATGCCATTTGGTCTGGTTTCGGCCTGGAACAAGCGCCGTCGAAGCAAGTCCGAAGATCATACTGACCCTTGGGTTTATAGACCTGCGGAGTGCTGGCAACTCGAAGAACAAGTAACACGACCTGCGAAAAGACTGCATGGATCAGCTGTGTTCACTCTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGACAATCTGCTAGGGAAAGGAGGATTCGGCAAAGTGTACCGCGGCATTTTACGGTCGGGAGAGGTCGTCGCAATCAAGAAGATGGCGCTGCCAGCAATTAAAGAAGCCGAGGGGGAACGTGAGTTCCGAGTTGAAGTGGACATCTTGAGCAGACTCGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAACATAGATTCCTAGTATATGAATACATGCATAATGGAAACCTGCAAGATCATTTGAATGGAATTGGAGAAAGAAAAATGGATTGGCCCCTAAGACTCAAAGTGGCACTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGTTCTGATGTTGGAATTCCCATTGTTCATAGAGATTTCAAATCAACCAATATTCTCTTAGATGCTAACTTTGATGCAAAGATATCTGACTTTGGGCTTGCCAAGTTAATGCCAGAAGGTCAAGAGACACATGTCACGGCCAGAGTTCTTGGAACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGGAAACTTACTCTGCAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAACTTTTGACTGGACGCCGAGCAGTTGATCTAAACCAAGGTCCCAATGATCAGAACCTTGTACTACAGGTGAGGCATATTCTGAATGATCGAAAGAAGCTGCGTAAGGTCATAGATCCAGAGATTGCCCGAAATTCTTACACTATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGCGTCCGAACTGATAGTAATGAGAGACCTTCAATGGCAGAATGTGTACAGGAACTCCTAATGATTATCTATACAAATTCAAAAGTTGCACAGACAATTCCTCATCTTGTGTTTATTAATTAA 1086 0.4365 MPFGLVSAWNKRRRSKSEDHTDPWVYRPAECWQLEEQVTRPAKRLHGSAVFTLKEMEEATCSFSDDNLLGKGGFGKVYRGILRSGEVVAIKKMALPAIKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDANFDAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEIARNSYTIQSIVMFANLASRCVRTDSNERPSMAECVQELLMIIYTNSKVAQTIPHLVFIN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1832 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Amo05g1832 361 Gene3D Phosphorylase Kinase; domain 1 31 141 - -
Amo05g1832 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 355 - -
Amo05g1832 361 Gene3D Transferase(Phosphotransferase) domain 1 142 355 - -
Amo05g1832 361 ProSiteProfiles Protein kinase domain profile. 63 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1832 361 Pfam Protein kinase domain 64 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1832 361 SUPERFAMILY Protein kinase-like (PK-like) 50 353 IPR011009 -
Amo05g1832 361 CDD STKc_IRAK 69 340 - -
Amo05g1832 361 PANTHER OS01G0750732 PROTEIN 1 355 - -
Amo05g1832 361 PIRSF ILK 33 353 - -
Amo05g1832 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1832 Amo-Chr5 38274017 38277083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1832 46 344 Receptor kinase-like Gene Family AT3G58690 47.697 2.68e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Amo05g1832 Pkinase 3.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1832 - - gmx:100796654 652.129