Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1821 ATGTGTTGGCGAAGATTGGTCGGCTTCACTAGAGAGTGTGCTGTGCTACGGAGTACCGAAGCTGGGCGAGACTGCCATCGATCGCGAACGGCTGGTGGAGATACTCTAATTTCACAGATGGGAATTAGCCGCTTCGTGCCGACTAACAGTAGAGATGGATACCATAAAGGGGATGCGAGATGTGATCCAGGTAACCAAACAGATGACTCCGCTGAATTTGATGTAATGAATGAGGATTCAGATGAAGAAGCATCTGGTTACGGAGATGTATTGGGGCTGACGGCAGAGGATATTAACCGGATGGTGTTTCGAACTGAGCAACGAGCCTATGAATTTTACCTGCGATTAGGAAAATGCCATGGGTTTGGTGTCCGGAAAGGGGATTATTGCAAGGATGAAAATGGAAATTTGATCCGTAGAAGATTCTTCTGCAACCGGGCCGGGTTGAGAGATGAGAAGCACTATGCAAGATTTGATAGGAAGAGAATGCATAAACCAGAAACCCGCACAAATTGTGAGGCAAAGTTATCAATATATTTGGATCGAGGTACTAGTAATTGGAAGGTTAGGAAGGTGATCCTTGACCACAACCATGACCTGACCCCGATAGGTATGGTTCACTTGATGCCTCAGTTTCGTGGATTGTCAGATGATGCGAAGGTACACATGGAAAGCATGCATAGCTATGGACTTCCTACCTCGAAGATAGTCGGATACATGTCTGGAATTGCAGGAGGTTACTCGCTGCTGGGGTTTACAAAGAAGGATGCGTATAACCACTTAGATAAAAAGAAGCGGGGGAACATCGCCGATGGTGACACGAACGCCACTGTCGTGTATCTACAAGGAAAAGCAGCTGCAGATCCAATGTCAACGGCGAGGTATAACGTCACTAACGACGGTATGTTGGCTAACTTGTTCTGGGCAGATGGTGCTAGTAGAGCAGACTTTCAACACTTTGGAGATGTTGTGGCCTTTGATTCTACGTATAGGAAGAACAAGTACAGGAGACCGTTGGTGATATTTTCAGGAACTAATAATCATAGGCAGACCACAATTTTTGGATTTGGGCTCCTATTGGACGAAACCACAGCCTCATACACGTGGATGCTTGAAAACTTGCTGGAGGTTATGTGTAACAGGATGCCGTCAGTGGTCGTCACAGATGGAGATGATGCAATTATTGCAGCGGTCCGAAAGGTCTTCCCAGATACAACGCACCGCCTTTGTGCATGGCATCTTCAGAAGAACGTCACATCAAACGGGAATGAGCATATGTTTAGAGATTTATTTTCCAAATGGCTGTATTCCGACATGGGCATTGAGGAATTTGAGAATGAGTGGGCCACTGCTACAGAGGAGTTCCGTTTCAACGAAAAGTGTTGGGCCCTACAGATGTACAAGAAAAAACACATGTGGGTCAGTGCATATCTGAGGGGAAAGTTTTGTGCTGGATATCGAACGACATCGAGGTGCGAGGGATTAAACTCTCATGTCAAGAAGTTCCTGACTTCCAGGCACACAATTTTGGAGCTTGTGCATAATTTGGAGGTGCTTGTACGTGAGTACCGAAATAATGAGATGGTGGCACAATTTAACTCCGTGAATAGCATCCCTGTGATGACAACATGTCTTGATCCAATTGAGAAGGGGGCTGCTAGGATGTACACACGAGCAATTTTCTCTCTAGTGAAAAAGGAGATTGATGCTGTCAGAGTGGTGAATTATGTAGCGAAGAGGAGAATTTCAACCACAATAGTATACACGACCGAAGAATATGGTAATCCGAGTCGCACTTTCATCACTCAGTTTGATAGGAACATGGGAAAATTTCTCTGTCACTGCAGATTTTGGGAACGAGAAGGCTTCCCGTGCCGACACATGTTCTTTGTCATGAAGTACGAGCATGTTCAAGAAATACCGCATCGTTTAGTTCTTACACGGTGGTGGAAAGACGCGAAATCTATCGATGCATATGTAGAGCAAGGTGAAGCAGACGATGAGAGGGGATTCTTAATGCGGCATGGCGCTCTTCACGAGGCATCCCAGTGGCTGTTGTCTCTTAGCGCTAGGAATCAAGTGGTGTACACAGAGGCCGTAAAGGGAATTCGGGCCTTGTGTACACGTCTGGTTGAAGCATTCAGTAGAAATGATGCGACGGGACAACACAGGAAAGAAGGGTGCGTGAAGGACCCGGTGGTCGTTAGGACAAAGGGTGCACCATGA 2226 0.4627 MCWRRLVGFTRECAVLRSTEAGRDCHRSRTAGGDTLISQMGISRFVPTNSRDGYHKGDARCDPGNQTDDSAEFDVMNEDSDEEASGYGDVLGLTAEDINRMVFRTEQRAYEFYLRLGKCHGFGVRKGDYCKDENGNLIRRRFFCNRAGLRDEKHYARFDRKRMHKPETRTNCEAKLSIYLDRGTSNWKVRKVILDHNHDLTPIGMVHLMPQFRGLSDDAKVHMESMHSYGLPTSKIVGYMSGIAGGYSLLGFTKKDAYNHLDKKKRGNIADGDTNATVVYLQGKAAADPMSTARYNVTNDGMLANLFWADGASRADFQHFGDVVAFDSTYRKNKYRRPLVIFSGTNNHRQTTIFGFGLLLDETTASYTWMLENLLEVMCNRMPSVVVTDGDDAIIAAVRKVFPDTTHRLCAWHLQKNVTSNGNEHMFRDLFSKWLYSDMGIEEFENEWATATEEFRFNEKCWALQMYKKKHMWVSAYLRGKFCAGYRTTSRCEGLNSHVKKFLTSRHTILELVHNLEVLVREYRNNEMVAQFNSVNSIPVMTTCLDPIEKGAARMYTRAIFSLVKKEIDAVRVVNYVAKRRISTTIVYTTEEYGNPSRTFITQFDRNMGKFLCHCRFWEREGFPCRHMFFVMKYEHVQEIPHRLVLTRWWKDAKSIDAYVEQGEADDERGFLMRHGALHEASQWLLSLSARNQVVYTEAVKGIRALCTRLVEAFSRNDATGQHRKEGCVKDPVVVRTKGAP* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1821 741 MobiDBLite consensus disorder prediction 49 68 - -
Amo05g1821 741 PANTHER OS02G0262500 PROTEIN 97 698 - -
Amo05g1821 741 MobiDBLite consensus disorder prediction 51 67 - -
Amo05g1821 741 Pfam MULE transposase domain 323 417 IPR018289 -
Amo05g1821 741 ProSiteProfiles Zinc finger SWIM-type profile. 600 636 IPR007527 GO:0008270
Amo05g1821 741 Pfam FAR1 DNA-binding domain 111 201 IPR004330 -
Amo05g1821 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 97 698 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1821 Amo-Chr5 37698088 37703344 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g1821 MULE 1.5e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1821 - - adu:107468207 1189.48