Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1815 ATGTCGAATTTGGATCTCTCAAAAATTTCTCTGCGGCCATTCAAGCTAAGCGATGTTGACGACTTTTTGCTATGGGCTGGGGATGATCAAGTCACACAAAACTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCGTGGCGACGCTCAATCTGCCTTGACGACCGTGATGATAGATGCAAGGCTGACATAGGCTATGCCGTGGCGGCAGATTACTGGGGCCAAGGCATAGCCACCAAAGCAGTGAAGATGGCTGTACCTCAAGTGTTCAATGACTTGTCTCATTTGGTAAGGTTGCAGGCTTTCACTTCCCCTGAGAACAAGGCTTCTCAGAGAGTAGTGGAAAAGGCTGGGTTCCTTAAGGAGGGTCTGCTCAGAAAGTACATTTATTTTGAAGAGAACATTAAGGATTCGGTAGTGGTAGATTCTGAGAATTGTTTGGTATTTACCACTCTGGATAGGTTGATTTGGGTTCCCAAGCATATCATCCAGTTCTTTTGCAAACCTCTCCATATCACTGGCAGGCAATTTATGGTCTAA 576 0.4566 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPENKASQRVVEKAGFLKEGLLRKYIYFEENIKDSVVVDSENCLVFTTLDRLIWVPKHIIQFFCKPLHITGRQFMV* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1815 191 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 153 - -
Amo05g1815 191 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 5 153 - -
Amo05g1815 191 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 152 IPR016181 -
Amo05g1815 191 Pfam Acetyltransferase (GNAT) domain 9 131 IPR000182 GO:0016407
Amo05g1815 191 Gene3D - 2 157 - -
Amo05g1815 191 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 148 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1815 Amo-Chr5 37636787 37638380 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo05g1815 Acetyltransf_3 2.7e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1815 - - gmx:100527210 246.899