Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1791 ATTCAGAGAGAAGACAAAGCTCGCCACCAAAACCCTAAGTTTGCCGCCGTAGCCATTGCCGCCTCTATCGCCACCGCAGCACCCAATGATCATTATATTCTTCTTGAGGGAACCTTCCTCAAGCCTAACATGGTTACCCCTGGCTCTGATAGCCCAAAGGTTCTACACCCTTTTGGCTATCACTCTTGGCAGAGTGGGAGGATGGAGATGGAGACATCAGCTCCATGTATTTATAAGAAGTACTTATTTGGAGAGATTTTTCACGGAAAAGGTCTTGATTGGCAAGAGTTTGTCAAAATTTTAGGTTTACTAGTAATAAACTCAACAAAATGCTTCATAGAAAAAAATAATGCTGATAATGCTGCAACAACACTAATGGCTCATTTAGCTCCTAAAATAAAGGTTTTAAGGGATGGGCAGTGGCAAGAGCAAAATGCAGCCATAATTTAA 450 0.4178 IQREDKARHQNPKFAAVAIAASIATAAPNDHYILLEGTFLKPNMVTPGSDSPKVLHPFGYHSWQSGRMEMETSAPCIYKKYLFGEIFHGKGLDWQEFVKILGLLVINSTKCFIEKNNADNAATTLMAHLAPKIKVLRDGQWQEQNAAII* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1791 149 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 89 149 - -
Amo05g1791 149 Gene3D - 131 147 - -
Amo05g1791 149 Gene3D - 93 130 - -
Amo05g1791 149 SUPERFAMILY Aldolase 21 55 - -
Amo05g1791 149 Pfam Fructose-bisphosphate aldolase class-I 27 53 IPR000741 GO:0004332|GO:0006096
Amo05g1791 149 PANTHER CALCIUM-TRANSPORTING ATPASE 89 149 - -
Amo05g1791 149 Gene3D Aldolase class I 6 59 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1791 Amo-Chr5 36801316 36803861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1791 89 149 Primary Pumps ATPases AT5G62670 70.492 2.89e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1791 K01535 - jre:109004996 90.8929