Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1772 ATCGTAGCGCGCCGCCCAGACCGTTCATCTACCTTCGTAGTCCCTGCTCTCACCATCGCTGGTCACCATCGTCGTATCTGCGCTCATTGTCGCCACTCAACCAAGTTGTCTCTGCTCTCACCGTTGCATGTCACCCTTGTTGTCTCTGTGCCGACCGTCGCCGCGCGCCTATCATCGTCGTTCTCTCTGCTCACCATCGTCGAGAAGTTTCCTAAGGAATGCTTGAGCACAATATTGGTGGCTTTTGATTTGACCAGAGAGGTAGTTCATAGTTGCAAGCTTGATCCTTGTGTTCAGAGAGTTTTATCAGCAAGACGAGCTTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTCGCGGAAGGCTAGCGAGGAAGCAAGCTGCTGTTACTCCAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCACACTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATCAAGAAGGCTGAGAGTAACACAGAACAAATCAAGGAATCTATATACTAG 564 0.5089 IVARRPDRSSTFVVPALTIAGHHRRICAHCRHSTKLSLLSPLHVTLVVSVPTVAARLSSSFSLLTIVEKFPKECLSTILVAFDLTREVVHSCKLDPCVQRVLSARRALRAVVRLQAIFRGRLARKQAAVTPRCMQALVRVQARVHTRNVRNSPEGKAVQTLLDQYRNQADPIKKAESNTEQIKESIY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1772 187 ProSiteProfiles IQ motif profile. 109 136 IPR000048 GO:0005515
Amo05g1772 187 PANTHER IQ-DOMAIN 5-RELATED 104 168 - -
Amo05g1772 187 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 104 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1772 Amo-Chr5 35801646 35804694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1772 106 176 IQD Protein Family AT1G72670 59.155 3.06e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1772 - - aip:107640854 226.483