Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1738 ATGAGTGTCTATGCACGCATGATTGTTAAGGGGCTTTCACATATTCATCGCAAAGGAATAGTCTACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATCGAAAACCAAAAAGGAGGAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCTAGAGGTATGCCGGCATACTTGTCACCGGAAGCGTTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGGTATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCTCTTTGCTTACTGAGGAGTTGAGGTACTTAATTGAGCATCATGAACTATCACCCAAGAAGCCACAGGGAATCAGTTTTTTCTATCATGATTTTCTGGAAAAGTGCTTTACGAAGGATCCTTGCAAGAGGTGGACTGCTGACATGCTTCTTGATCATCCTTTCCTTTATATCACACTTTTCATTGCAACCTTATTTATGGTTTATGTAGTTAGAGCCATTATGATGACATTCTAA 567 0.4145 MSVYARMIVKGLSHIHRKGIVYCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKKEEADVELWKSKPRGMPAYLSPEAFSGHIDAPMDIWALGCIGIEMLTGLPAWGESSLLTEELRYLIEHHELSPKKPQGISFFYHDFLEKCFTKDPCKRWTADMLLDHPFLYITLFIATLFMVYVVRAIMMTF* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1738 188 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1738 188 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 168 - -
Amo05g1738 188 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1738 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 20 32 IPR008271 GO:0004672|GO:0006468
Amo05g1738 188 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Amo05g1738 188 SUPERFAMILY Protein kinase-like (PK-like) 3 171 IPR011009 -
Amo05g1738 188 Pfam Protein kinase domain 3 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1738 188 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1738 Amo-Chr5 34769670 34770279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1738 4 168 MAP Kinase Kinase Kinase AT4G36950 42.604 6.03e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo05g1738 Pkinase 3.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1738 - - aip:107647747 324.709