Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1708 ATGAATATTCGGGGTCAGGGTCAGGGTCCGCCTCCGGGTCCGGCAGCGGCGGCAGGGATGATGGATGGGATTGGGGTTCCTGTTGCTCCGAATCCGATAAGCAGGAAGAAGGGGACCGGGGTTAGGGCGTGGCTGCTTCTCGATTCCAGTGGTCAGAAGCAGGTTGTGGAGGCCGGCAAGCACGCCATCATGCGGCGCACCGGTCTCCCCGCCCGTGACCTTCGTATCCTCGACCCCCTCCTGTCCTACCCCTCGACTGTGTTGGGCCGTGAGAGGGCCATCGTGATCAACCTCGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCCCGCGACCCCTCCGTGACCCCTTTCGTGGAGGAGCTCCACTCGAGGATCCTCCGGCACCACCAAGCCCAGGGAGCTGCTGTGGCCGCTGCGGCTTCGGATGATTCCAAGCCGAGCAAAATGTATGACTCGGAAGAAGGGCAATCAAGAGAGGGACAGGATGAAGATGAAGATCCCGATCCCGTTGGKGAGSAAGTGAAAKCCCAATCGAAGCAGAATGRTATCCAGAAYGGCGATGGCATGAAGATCCTGCCRTTCGAGTTTGTGGCACTGGAGGCCTGCCTGGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACCTTGGAACAAGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCAAATTAAGAGTCGCCTTGTTGCCATCACTGGTCGTGTTCAGAAGGTAAGGGATGAGTTAGAACACTTGCTCGATGACGACGACGATATGGCTGAGATGTATCTCACCGACAAGTTACAACAGCTCCGCAGTTCTTCTGCCTCGTCTATAAATGATGATGCTGTAGACAATGACCACCATAATCAGTTTGATGTCGATGACAGCATTCCTCCTGAAATATCACTGGAAGAGGGTGGAGCTGCTGCAAGCGATGACGATAATCAACATGATGATGACAGGTTATTAGTGGGAGTTAGCCGGGACAGCCGTGCTAGCACTACCTACAGTACCACAACTAAGCATCTTGACGTGGAGGAGCTTGAGATGCTCCTAGAAGCATATTTTGTGCAAATCGATGGCACACTCAACAAGCTCTCTACGCTAAGGGAATACGTGGACGACACAGAAGACTACATCAACATAATGCTGGATGACAAACAGAATCATCTGCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTTCCTTTGTCGTTGTCGCTGGTATTTTTGGCATGAATATTCATATTGAGCTATTTGATTCAAATGTTGCCGGGAATCGAGAGTTCTTCTGGACTGTTGGGGGCAGCACTGCCGGAACCATTTTCTTGTATGTGGTTGCCGTTTCCTGGTGCAAGTACAAACGCTTGCTCGAGTAG 1449 0.5252 MNIRGQGQGPPPGPAAAAGMMDGIGVPVAPNPISRKKGTGVRAWLLLDSSGQKQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEELHSRILRHHQAQGAAVAAAASDDSKPSKMYDSEEGQSREGQDEDEDPDPVGEXVKXQSKQNXIQNGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLQQLRSSSASSINDDAVDNDHHNQFDVDDSIPPEISLEEGGAAASDDDNQHDDDRLLVGVSRDSRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSSFVVVAGIFGMNIHIELFDSNVAGNREFFWTVGGSTAGTIFLYVVAVSWCKYKRLLE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1708 482 Gene3D Magnesium transport protein CorA, transmembrane region 178 410 - -
Amo05g1708 482 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 482 IPR039204 -
Amo05g1708 482 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 35 482 - -
Amo05g1708 482 Coils Coil 206 226 - -
Amo05g1708 482 CDD Mrs2_Mfm1p-like 44 480 IPR039204 -
Amo05g1708 482 MobiDBLite consensus disorder prediction 1 21 - -
Amo05g1708 482 Pfam CorA-like Mg2+ transporter protein 361 469 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo05g1708 482 MobiDBLite consensus disorder prediction 329 343 - -
Amo05g1708 482 Gene3D - 31 115 - -
Amo05g1708 482 MobiDBLite consensus disorder prediction 293 343 - -
Amo05g1708 482 MobiDBLite consensus disorder prediction 138 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1708 Amo-Chr5 33755391 33757839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1708 44 482 MRS2 Gene Family AT3G19640 65.188 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1708 - - adu:107488664 838.565