Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1707 ATGGAACTAGCAAAGGCAACCATAGCAGCTTGTCAATTCCACCAACACCACCAGTACCAGAACAGCAAGTGCATCAAGATCTTTTGGGGCTTGACGATTCTCCTCCTACTAACTCTATCCAATCAGTCAGCTGCATCAGATGCCAACATCGTCAAGAGCTTACCAGGCTTCCCCGGGGAGCTACCTTTCCTGCTCGAGACAGGGTACATAGGCGTAGGGGAAGTAGATGAGGTTGAGCTATTTTATTACTTCATAGAGTCAGAGGGGGAGCCAGAAGATGATCCACTCGTGCTTTGGCTCACAGGAGGCCCTGGTTGCTCAGCCCTCTATGGTCTCATGTATGAGACTGGTCCATTATCTTTCGATTACGGAAGGTCTAGTGGGGGAAACAAACCAGTTTTAACTTTGAACGATTACTCATGGACTAAGGTTGCCAACATTATCTTCTTGGATGCGCCCGTTGGCACGGGATTTTCATATGCCAAAACTTCATCTGGATACAGCACGAGTGACACAAAGTCAGCTGCAGACATTTATATGTTTCTGAGAAAGTGGCTTGTGGCTCACCCTAGGTTTCGTGCAAATCCTCTCTACATTGCTGGTGATTCTTATAGCGGAATCACGGTTCCAGTCCTTGTTAAAGAAATCTCTGATGGTAACAAAGCTGGAACATTGCCACCCATCAATCTCAGAGGTTACATTCTAGGAAACCCATTAACTGATATCGGATATGATATAAACTCGAGRGTTAAGTTTTCCCACAGAGTTGGACTTCTATCTGATGAACTCTATCTGGCACTGGAGCTTTCTTGTAAAGGAGAGTATGTTCGCCCAAATAAAAGTGAAGGTGCATGCATCAGCAATCTTGAGATAATGGATCTGTGCTTGAAAGACATATTCRCTCCGATGATATTGGAGAGAAAGTGTAGCCCGTTCTCATCAGCAAAGCCGAACAACATTCTTAAGTGGGGTTCAACCACAACCCCATCTTCAGATACACTTCTTTTAGAACTTCGACGCTGCAGGGACTATGACTACTTGTTAGTAAACATCTGGGCTAATGATGGAGAAGTTCAAGAAGCTCTGCATGTTAGAAACGGAACTATAAAAACGTGGGAGATGTGTAGTAAAAACTTAGCTTATGTGCATGACATAACAAGTAGTGTTGAATATCACCTTAACTTTACCAGCGAAGACCTTAGAGCCATCATTTACAGCGGAGATCATGATCTGATTGTTCCATATGTGGGCACTGAGGAATGGATACAATCTCTGAATTTGACTGTTTCTTCCGATGATGTGTGGAGGCCATGGTTTCAGGATGGACAAGTTGCAGGTTACACGGAGATATACACAAAGAATAAGTACGTGATGACACTTGCTACTGGAGGAGGTCACACAGCAGCAGAGTACAAGCCCAAGGAAAGCTTTARCATGATTAGCAGGTGGCTTTCTTATTACTATCTTTAG 1470 0.4395 MELAKATIAACQFHQHHQYQNSKCIKIFWGLTILLLLTLSNQSAASDANIVKSLPGFPGELPFLLETGYIGVGEVDEVELFYYFIESEGEPEDDPLVLWLTGGPGCSALYGLMYETGPLSFDYGRSSGGNKPVLTLNDYSWTKVANIIFLDAPVGTGFSYAKTSSGYSTSDTKSAADIYMFLRKWLVAHPRFRANPLYIAGDSYSGITVPVLVKEISDGNKAGTLPPINLRGYILGNPLTDIGYDINSRVKFSHRVGLLSDELYLALELSCKGEYVRPNKSEGACISNLEIMDLCLKDIFXPMILERKCSPFSSAKPNNILKWGSTTTPSSDTLLLELRRCRDYDYLLVNIWANDGEVQEALHVRNGTIKTWEMCSKNLAYVHDITSSVEYHLNFTSEDLRAIIYSGDHDLIVPYVGTEEWIQSLNLTVSSDDVWRPWFQDGQVAGYTEIYTKNKYVMTLATGGGHTAAEYKPKESFXMISRWLSYYYL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1707 489 SUPERFAMILY alpha/beta-Hydrolases 51 486 IPR029058 -
Amo05g1707 489 Pfam Serine carboxypeptidase 55 485 IPR001563 GO:0004185|GO:0006508
Amo05g1707 489 Gene3D alpha/beta hydrolase 59 487 IPR029058 -
Amo05g1707 489 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 26 488 - -
Amo05g1707 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Amo05g1707 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Amo05g1707 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Amo05g1707 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 488 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1707 Amo-Chr5 33751262 33754135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1707 348 485 Calmodulin-binding Proteins AT2G22960 50.000 2.74e-40 141