Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1697 ATGTCGCCGGAAAGTGACATCACGATGCCATCTCCGGCATCTTTCCGTCTCCGGTGGGATGTGTTCCTGAGCTTCCGCGGCTCCGACACCAGGGAGGCCTTCACGGAGGACCTCCACGGCGCTCTCGAAGCCGCTGGCGTGCGCGCCTTCATCGACAACGAAGGATTACAGCGTGGCGACTCGATCTCGCCGAGTCTGGTGGAAGCAATCGCGGATTCCGCCGCCGCCATTGTTATTCTCTCGCCCGACTACGCTTCCTCGCACTGGTGCCTTGAGGAGCTGGCGAAGATCTGCGAGTGCGGTTGGAAGCTGGTGCTGCCCGTTTTCTACCGGGTTGACCCGTCTCATGTCCGAAAACAGAAGGGACCTTTCGAGAAGGCGTTTCGGTTGCACGAAGAGAGTGAGAGGTTTAGGAATAAGGTTGCCAGTTGGAGGAGTGCTATGAACAAAGTTGGTGGAATTGCTGGTTGGGTTTTTGGTGATCATAATAGCAACAAGGATCAGTTAATTCGAGTTTTGGTGCAAACGGTCTTGAAGCAGATGAGGAATACTCCATTGACAGTGGCACAGTATACAGTTGGGCTTGATGACAGAGTTGCAGAGTTAAGGAAGTTAGTTGACGTAAGATCCAGTGATGTCAAAGTGATAGGATTGTATGGAATGGGAGGGGTCGGTAAGACAACTCTGGCCAAGGGACTCTTCAACAGCCTTGTTGATCATTTTGATAGACGCAGCTTCATCTCAAATGTTAGAGAAGTTGCAAACAATGAAGATGGTATGGTTTCACTCCAGGGAAGAATTCTTGGTGATCTTTCCCCTGGAACTGAGAATCCCATCAATGATGTTAATGCTGGTATTTCTGCGATCAAAAGAATTGTAGAGGAAAATCGAGTTCTGGTTTTTCTTGATGATGTTGATGATGTAAAACAGCTTGACTCATTAATTGGTAAGAGAGAATGGTTTTCTAAAGGAAGCTGTGTTGTGATTACTACACGGGACAGAGCCGTTTTACAGGAGAGGTATGTTAATGTGAAGTATGAGGTGAAGGAATTGAAAGTGTCTCAAGCACTGGAATTGTTCTGTTACCATTCCATGAGAAGAAAGGTTCCTGCTGATGGTTTTCTCAATCTCTCTGAACAAATTGTGTCTCTTACAGGAGGATTGCCTCTGGCTTTGGAAGTTTTCGGCTCATTCTTATTCGATAAGAGGACGATTAACGAATGGAAAGACACAGTGTTGAAGCTTAAAGATATTCGGCCGGATAAACTTCAAGGTGCTCTGAAGATCAGCTTTGATGCCTTGGATGAACAAGACAAGTGTGTGTTCCTTGACATTGCTTGCTTGTTTGTGCAAATGGAAATGAAGAGGGATGATGTGGTTGATATACTGAATGGTTGTGGTTTTAGAGGGGAGATTGCAATAACGGTCTTAACTACAAAGTGTTTAATTAAGATCATTAAGGATGGTGTAGTGTGGATGCATGATCAGGTTAGAGACATGGGAAGGCAAATTGTTCAAAATCAAAGTATTCTAGATTGTGGTTCACGTAGCAGGTTATGGGATCGTCATGAAATCTTGGGTGTCTTGAAGAATAAGAAGGGAACAAGAAAAGTTGAAGGTATTGTCCTTGATTGTGTAAAGAGGAGTCTGGCTAAACCTAGAGACCGTACTGCTGAAGAGATTACCTGGGACAATTTTCGACAAATGCCAGGTTACAAAACAGCATCAGCATATATGAAGGCAAAGTATAAGAAATATGTGGAGCATAGAGGAGAGAAAGCAAAAAAATTTACACTTGATACAAAGGACTTCCAACCTATGGTTTCCTTAAGGTTGCTTCAAATTAATTATTCAAKACTTGAAGGACAGGGCAAATTTCTGCCTCAAGGAGTAAAGTGGTTACAATGGAAACAATGTCCTCTAAAGAACATGTCTTCTTCCTATTATCCATTGGAACTTGCCGTGCTTGATCTCTCGGAAAGCAAGATTGAAACACTGGGGGGAAAGCATCATAACAAGGTAGCTGAGTGCCTGATGGTTTTAAACCTCTCCAGTTGCCACCATTTAGTTGCAATTCCGGATTTAACTGGTTACCATTGTCTAAAAAAGATTRTATTGGAGAACTGCACTGCTTTAACTAGGATTCATGAATCASTTGGAAATTTAAGTACCCTGGTTCACTTGAACTTAGGCRCATGCYATAACCTTGTTGAGTTACCTAGTGATGTCTCTGGGTTGAAACATCTCGAGGACTTGATTCTTTCTGGATGTTGGAAATTGAAAGCATTACCAAAGGACCTAAGCTGCTTGGTCTCTTTAAGAAAGCTTCTCATTGATGAGACTGCCATAACTGTGTTACCTGATTCCATCTTCCACCTCACCAAACTGGAAAAGTTGAGTTGCAGTGGTTGCCGTCTTTTGAGAAGGATACCCACCAGCATTGGGAAACTCTGTTCTCTGCGAGAATTATCACTAAACCATACAGCTTTGGATGAATTACCTGATTCTATTGGATGTTTGCAGAATCTTGAGAAACTTGGTTTGGTTGGGTGTAAGTCCCTCTCTATTATTCCAGATTCTGTAGGGACACTAATTTCATTGACACATTTGTTTTTGGATGTCAGTGGAATCAAAGAGTTGCCTGATTCTATTGGTTCTTTATCATATCTAAGGCAATTGTCTGTTAGTGGCTGCACTTCTCTTGGTGAATTGCCTATGTCAATAAAGGCATTATTCTCTCTTGTTGAGCTTCATTTAGATAAGACACCAATTAMTATTTTGCCWGAACATATAGGGGCCATGAAAATGCTACAAAAGCTTGRGATGGCGAATTGTAAAGATCTCAAGTTTCTACCTGCATCGATCGGAGACATGTCGGCCCTTACTGCCTTGGACATGTATAACACTAATATTACTGAATTGCCAGAGTCAATTGGAATGTTGGAAAATCTTATTCATTTGAGGATAGACATGTGCAAAGAGCTCAAAAGGCTTCCAAAATCCTTGGGAAATTTGAAATCTCTATGCTGGTTACAGATGAAGGAAACAGCAGTTACACAGCTACCTGATAGCTTTGGGATGCTTTCAAGATTGGTAAAATTAGACATGGAAAGAAGGTATTACCTCAATATGGTTGGAGACAAGAATACYGAAGAACCCAATTCAGTTGGAATCTTAAGARGTTTTTGTAAACTAACYTTGTTGCAAGAGCTAAATGCACATGGATGGAGAATAGCTGGAAAAATCCCAGATGATTTTGAAAAGTTGTCATCACTAGAAACTCTAAATTTATGCCACAATAATATTATCAGCCTTCCAGCCAGCATGAGAGGCCTTTCCTGTCTAAAAAAGCTTTTGTTGTCAAATTGCACTCAGCTCATTTTTCTGCCATCTCTTCCCTCTAGCTTAGTAGAGGTCGATGTTGCGAACTGTATTGCATTAGAGCGCATATCTGATATTTCAAACTTAGATAACATAGAGGAGTTGAACCTTACAAATTGTGAAAAGCTGGAAGACATACCAGGTATTGAGCACTTAAAGTCCTTGAGAAGATTGTACATGAGTGGATGCATTGGATGCTCCCATGCTGCGATGAGAAGATTTTCCAAGGATCTGCTTAAAAATTTACGGATTTTGATTATGCCTGGAAGCAAAGATATTCCAGATTGGATTTCAGGAGAATCAATTATCTTTTCCAAGAGAAGGAACCGTGAGCTTAAAGGTATTATTTGTGCCGGTGTACTCTCTTTCGACGGTATACCTGAAAACCAAAGAGATGCCTTGCAGTTAGTGGATGTTCAGGCAAAAGTCTTCAATTTGACTGATAATGTATATAGCACTACGTTTCGCCTGTTAGGTGTACCTAGGACAAATGAAGACCACATCTTCTTGCACAGATTTGGAGCTCATACTTCATTGGTTCACCAGTTGAAAGATAAATACACCTTGCATTTGACAAAGCGGAATGCACCCTTTGTTCAGGAGTTGAAGCTGAAGAGCTGCGGAATTCATTTGGTCTTCGAAGGTGATGATGACTATGAAGGAGATGAAGAATCACTAGATGAAAGCCAATATTCGGTGTCACAAAAATTAGCCAAGTTCTTCAACTCTTGTTATTGCCCGAGATCGCATTTGCATGTGAATACAAGTACGTCAAATGAACCACTTGAGATCGGGAGGAGTATAACAAGAAGCACAGTTCCAGACCCATGGCTTCGTTCCATCCTTTTTAGTGCGACATTTTTGTGTGCTTTGAGCTATTTATACTTAAGATACCTCAATTTTTGA 4287 0.4161 MSPESDITMPSPASFRLRWDVFLSFRGSDTREAFTEDLHGALEAAGVRAFIDNEGLQRGDSISPSLVEAIADSAAAIVILSPDYASSHWCLEELAKICECGWKLVLPVFYRVDPSHVRKQKGPFEKAFRLHEESERFRNKVASWRSAMNKVGGIAGWVFGDHNSNKDQLIRVLVQTVLKQMRNTPLTVAQYTVGLDDRVAELRKLVDVRSSDVKVIGLYGMGGVGKTTLAKGLFNSLVDHFDRRSFISNVREVANNEDGMVSLQGRILGDLSPGTENPINDVNAGISAIKRIVEENRVLVFLDDVDDVKQLDSLIGKREWFSKGSCVVITTRDRAVLQERYVNVKYEVKELKVSQALELFCYHSMRRKVPADGFLNLSEQIVSLTGGLPLALEVFGSFLFDKRTINEWKDTVLKLKDIRPDKLQGALKISFDALDEQDKCVFLDIACLFVQMEMKRDDVVDILNGCGFRGEIAITVLTTKCLIKIIKDGVVWMHDQVRDMGRQIVQNQSILDCGSRSRLWDRHEILGVLKNKKGTRKVEGIVLDCVKRSLAKPRDRTAEEITWDNFRQMPGYKTASAYMKAKYKKYVEHRGEKAKKFTLDTKDFQPMVSLRLLQINYSXLEGQGKFLPQGVKWLQWKQCPLKNMSSSYYPLELAVLDLSESKIETLGGKHHNKVAECLMVLNLSSCHHLVAIPDLTGYHCLKKIXLENCTALTRIHESXGNLSTLVHLNLGXCXNLVELPSDVSGLKHLEDLILSGCWKLKALPKDLSCLVSLRKLLIDETAITVLPDSIFHLTKLEKLSCSGCRLLRRIPTSIGKLCSLRELSLNHTALDELPDSIGCLQNLEKLGLVGCKSLSIIPDSVGTLISLTHLFLDVSGIKELPDSIGSLSYLRQLSVSGCTSLGELPMSIKALFSLVELHLDKTPIXILPEHIGAMKMLQKLXMANCKDLKFLPASIGDMSALTALDMYNTNITELPESIGMLENLIHLRIDMCKELKRLPKSLGNLKSLCWLQMKETAVTQLPDSFGMLSRLVKLDMERRYYLNMVGDKNTEEPNSVGILRXFCKLTLLQELNAHGWRIAGKIPDDFEKLSSLETLNLCHNNIISLPASMRGLSCLKKLLLSNCTQLIFLPSLPSSLVEVDVANCIALERISDISNLDNIEELNLTNCEKLEDIPGIEHLKSLRRLYMSGCIGCSHAAMRRFSKDLLKNLRILIMPGSKDIPDWISGESIIFSKRRNRELKGIICAGVLSFDGIPENQRDALQLVDVQAKVFNLTDNVYSTTFRLLGVPRTNEDHIFLHRFGAHTSLVHQLKDKYTLHLTKRNAPFVQELKLKSCGIHLVFEGDDDYEGDEESLDESQYSVSQKLAKFFNSCYCPRSHLHVNTSTSNEPLEIGRSITRSTVPDPWLRSILFSATFLCALSYLYLRYLNF* 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1697 1428 Gene3D - 351 435 IPR042197 -
Amo05g1697 1428 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 1329 - -
Amo05g1697 1428 Gene3D Ribonuclease Inhibitor 1055 1229 IPR032675 -
Amo05g1697 1428 Gene3D Ribonuclease Inhibitor 908 1054 IPR032675 -
Amo05g1697 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Amo05g1697 1428 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Amo05g1697 1428 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Amo05g1697 1428 Gene3D Ribonuclease Inhibitor 585 907 IPR032675 -
Amo05g1697 1428 SUPERFAMILY L domain-like 493 946 - -
Amo05g1697 1428 PRINTS Disease resistance protein signature 292 306 - -
Amo05g1697 1428 PRINTS Disease resistance protein signature 885 901 - -
Amo05g1697 1428 PRINTS Disease resistance protein signature 385 399 - -
Amo05g1697 1428 PRINTS Disease resistance protein signature 215 230 - -
Amo05g1697 1428 ProSiteProfiles Leucine-rich repeat profile. 1091 1112 IPR001611 GO:0005515
Amo05g1697 1428 Gene3D - 14 180 IPR035897 -
Amo05g1697 1428 SUPERFAMILY L domain-like 912 1215 - -
Amo05g1697 1428 SMART LRR_typ_2 864 887 IPR003591 -
Amo05g1697 1428 SMART LRR_typ_2 770 793 IPR003591 -
Amo05g1697 1428 SMART LRR_typ_2 1089 1112 IPR003591 -
Amo05g1697 1428 SMART LRR_typ_2 958 981 IPR003591 -
Amo05g1697 1428 SMART LRR_typ_2 911 934 IPR003591 -
Amo05g1697 1428 SMART LRR_typ_2 817 840 IPR003591 -
Amo05g1697 1428 Pfam NB-ARC domain 204 417 IPR002182 GO:0043531
Amo05g1697 1428 Gene3D - 181 346 IPR027417 -
Amo05g1697 1428 Pfam TIR domain 19 183 IPR000157 GO:0007165
Amo05g1697 1428 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1329 IPR044974 GO:0006952
Amo05g1697 1428 SMART till_3 18 154 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1697 Amo-Chr5 33520565 33529399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1697 762 987 WRKY Transcription Factor Family AT4G12020 30.350 7.83e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1697 - - adu:107489074 2676.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g1697 05 33520565 33529399 Amo15g0261 15 9705647 9712990 hybridization
Amo05g2813 05 73304041 73312005 Amo05g1697 05 33520565 33529399 PCT
Amo15g0262 15 9713442 9722360 Amo05g1697 05 33520565 33529399 PCT