Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1657 CACTCCTTAGTCCTTACCCCAGCTTCAATCTTCACTCCTCACTCACTACTGACTCCGCCGCATACTTCGTTGTTGGGTTGCTGTTATCCGTCGTATTCACCGGCGGAGCAACTACTGAATCCATTCTGCGCTTTAGCTCCTTCCAGATATTTCAGCATCAAATATTGTCAAGTTATTCACTTAACTGAAGTTTCCATCGAAAAAGCCAAGATGTCGAGGAAGGGTTTGATGGAACAGGACCTGAGTAAGTTGGACGTGACAAAATTGCATCCACTTTCTCCGGAAGTCATATCTCGGCAGGCTACAATTAATATTGGCACCATAGGGCATGTGGCACATGGCAAATCAACTGTTGTGAAAGCAATATCAGGTGTTCAGACCGTGCGTTTTAAAAATGAGTTGGAGAGAAACATCACAATCAAGCTTGGCTATGCAAATGCAAAGATATATAAGTGTGAAGATGATAGGTGTCCAAGGCCTATGTGCTACAAGGCTTATGGAAGTGGAAAGGAAGATAGTCCAATGTGTGATGTACCAGGGTTTGAAAACTCCAAGATGAAGTTGCTGAGACATGTTTCTTTTGTGGATTGCCCAGGACATGATATTCTTATGGCCACAATGCTTAATGGAGCTGCAATCATGGATGGAGCTTTACTACTCATAGCTGCTAATGAGAGTTGCCCGCAACCACAAACCTCTGAACATTTAGCTGCTGTGGAAATTATGCGTCTACAGCACATAATAATTCTTCAGAACAAGGTTGATCTGATTCAAGAGAATGTGGCAATGAATCAGCATGATACAATTAAAAAGTTCATTGAAGGAACTGTAGCTGATAGTGCACCAGTGGTACCTATTTCAGCACAACTGAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAAAAGATCCCAATCCCAGAAAGGAATTTTACTTCGCCACCCAATATGATTGTTATTCGGTCATTTGACGTTAATAAACCTGGGTTTGAGGTTGACGAAATAAAAGGAGGTGTAGCTGGTGGAAGTATCCTGAGGGGTGTTTTGAGGGTCAACCAATTCATTGAAGTTCGACCTGGGATAGTTGTGAAAGATGAGAGTGGAAATATCAGATGCACACCCATATACTCTAGAATAGTTTCATTATTTGCCGAGCAAAATGAGCTTCAATTTGCTGTGCCAGGAGGTTTAATTGGTGTTGGAACAACAATGGATCCCACTTTGACCCGTGCTGACAGGTTGGTCGGGCAAGTTCTAGGAGAGGTTGGATCACTGCCGGAGGTCTTTGTTGAACTTGAGGTAAATTTCTTCTTGCTTCGACGGCTTCTCGGTGTTCGGACCAAGGGCTCAGAGAGACAGGGAAAGGTATCTAAGCTGGCTAAAGCAGAGATGCTAATGTTGAACATAGGATCAATGTCGACGGGTGCGAGAGTTGTTGCCGTGAAGAATGATCTGGCGAAGTTGCAACTTACCTCCCCTGTGTGCACTAACAAGGGTGAGAAGATCGCACTTAGCCGACGTGTTGAGAAGCATTGGCGTCTAATCGGGTGGGGTCAAATCCAAGCCGGAATCACTCTTGACGTCCCTGCCGCCCCAACTGAGTTGAAGTGA 1614 0.4411 HSLVLTPASIFTPHSLLTPPHTSLLGCCYPSYSPAEQLLNPFCALAPSRYFSIKYCQVIHLTEVSIEKAKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAMNQHDTIKKFIEGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFTSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLRVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKAEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTNKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPAAPTELK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1657 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 71 533 - -
Amo05g1657 537 CDD eIF2_gamma 103 310 IPR044128 GO:0005525
Amo05g1657 537 Pfam Initiation factor eIF2 gamma, C terminal 432 521 IPR015256 -
Amo05g1657 537 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 425 522 IPR009001 -
Amo05g1657 537 CDD eIF2_gamma_III 427 521 IPR015256 -
Amo05g1657 537 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 71 533 - -
Amo05g1657 537 Pfam Elongation factor Tu domain 2 338 420 IPR004161 GO:0005525
Amo05g1657 537 Gene3D - 100 310 IPR027417 -
Amo05g1657 537 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 100 309 IPR000795 GO:0003924|GO:0005525
Amo05g1657 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 316 IPR027417 -
Amo05g1657 537 SUPERFAMILY Translation proteins 310 424 IPR009000 -
Amo05g1657 537 PRINTS GTP-binding elongation factor signature 104 117 IPR000795 GO:0003924|GO:0005525
Amo05g1657 537 PRINTS GTP-binding elongation factor signature 193 203 IPR000795 GO:0003924|GO:0005525
Amo05g1657 537 PRINTS GTP-binding elongation factor signature 247 256 IPR000795 GO:0003924|GO:0005525
Amo05g1657 537 PRINTS GTP-binding elongation factor signature 209 220 IPR000795 GO:0003924|GO:0005525
Amo05g1657 537 Gene3D Translation factors 311 426 - -
Amo05g1657 537 CDD eIF2_gamma_II 311 424 IPR044127 GO:0000049
Amo05g1657 537 Gene3D Translation factors 427 525 - -
Amo05g1657 537 Pfam Elongation factor Tu GTP binding domain 102 306 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1657 Amo-Chr5 31834103 31838905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1657 71 533 Eukaryotic Initiation Factors Gene Family AT1G04170 89.655 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1657 K03242 - gmx:100805852 891.723