Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1646 ATGGCAGCAAAAAGTAGTGACTTGAAGCTTTTGGGTGGATGGTTCAGTCCATTTGTGACAAGGGTGAAGATTGCACTTAATATTAAAGGATTGGAATATGAGAACATTGAAGAGGACTTGAACTCCAAAAGTGATCTTCTTCTTCGTTCCAATCCTGTGCACAAGAAAATTCCAGTTCTAATTCATGGTGACAAACCCATATGTGAATCCTCAATCATACTTCAATATATTGATGAGGTTTGGTCCAATGCTCCTTCTATCCTTCCTCAAGATGCTTATGACAGAGCAATTGCTACATTCTGGGTTTCATACATTGATGATAAGTTATTACTTTGCATGAGAAACATTCTACTGGCTTTTGAAGATGAAGAGGAAAGGAAGCCACACTCCGAGCAATTGGAGGAAGAAATACTTGTGAAGTTGGAAGAGGCATTTGGAAAATGCAGTGAAAAAAAGCCCTTCTTTGGAGGGAGCAAGGTTGGAATCACTGACATTGCCTTTGGGAGCTTCTTGCCTTCTCTACGTGTGTTAGAAGAGATGAATGGAAAGAAGGTCCTCACCAACGACAAGTTTCCAGGGTTGGTGAATTGGGCTACGAATTTTATTGCGAATTCTGCTGTGACTGGAACTCTTCCAGAGATTGACAAGCTTGCTTTGTTTTGTAAGGCTCTTCGACAAAAACGGCTTATTGCTAAAGCTGCTGCCAAGTAA 711 0.4079 MAAKSSDLKLLGGWFSPFVTRVKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLIHGDKPICESSIILQYIDEVWSNAPSILPQDAYDRAIATFWVSYIDDKLLLCMRNILLAFEDEEERKPHSEQLEEEILVKLEEAFGKCSEKKPFFGGSKVGITDIAFGSFLPSLRVLEEMNGKKVLTNDKFPGLVNWATNFIANSAVTGTLPEIDKLALFCKALRQKRLIAKAAAK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1646 236 CDD GST_N_Tau 8 81 - -
Amo05g1646 236 PANTHER GLUTATHIONE S-TRANSFERASE U17 7 221 - -
Amo05g1646 236 CDD GST_C_Tau 92 224 IPR045074 GO:0004364|GO:0006749
Amo05g1646 236 Gene3D Glutaredoxin 1 87 - -
Amo05g1646 236 SFLD Main.3: Omega- and Tau-like 4 232 IPR045073 -
Amo05g1646 236 Gene3D - 88 232 - -
Amo05g1646 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Amo05g1646 236 Pfam Glutathione S-transferase, C-terminal domain 115 203 IPR004046 -
Amo05g1646 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 230 IPR010987 -
Amo05g1646 236 SFLD Glutathione Transferase (cytosolic) 4 232 IPR040079 -
Amo05g1646 236 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Amo05g1646 236 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Amo05g1646 236 SUPERFAMILY GST C-terminal domain-like 79 228 IPR036282 -
Amo05g1646 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1646 Amo-Chr5 31429433 31431966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1646 5 228 Glutathione S-transferase Gene Family AT1G10360 52.000 5.23e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1646 K00799 - gmx:547576 288.885