Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1629 ATGGATGATTCAACTTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCCAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGAAAAATTTTACATGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGTAGAGAGGAAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGACGGTTTAAACTGTCCTACAAGAATTTATATACACTCATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCATGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACAAAGCATGTCCATTCGTCGTACAATAGAGAATAATGTGGAGGCT 489 0.4131 MDDSTSDCQLNQGEVDYEFESNEVPEPLSVVDDQFVPKVGMTFTTLEDAEKFYMNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREEKWKSKISPTEKTNPTDGLNCPTRIYIHSLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHREQSMSIRRTIENNVEA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1629 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 142 - -
Amo05g1629 163 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1629 Amo-Chr5 30742319 30743258 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g1629 FAR1 1.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1629 - - adu:110280446 300.441