Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1628 ATGGGCTCATCAAATGCCTTTGGCTGGGCTGCAACAGATACCTCTGGTCATCTCTCTCCCTTCCATTTCTCAAGAAGGGAAAACGAAGCTGATGACGTCACTCTCAAAATCCTCTTCTGCGGGGTTTGCCATTCCGATCTGCACACAATCAAGAARGACTGGGGTTTCACTACTTACCCCGTTGTCCCTGGGCATGAAATTGYTGGTATTGTGACAAAAGTTGGAAGTAATGTGACAAAATTTAAGGAGGGGGATAGAGTTGGAGTTGGTGTAATAGTGGACTCATGTAAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAATTACTGTCCTAGAACTGTGTATACCTATAACTCTCCTTATAAAGGGACACGAACWCAGGGTGGCTACTCCGATTTCGTGGTTGTTCACCAGCGCTTTGTGCTTCGATTTCCCGACAACTTACCCCTTGATGCCGGTGCCCCTCTTCTGTGTGCTGGGATTACTGTGTATAGCCCMATGAAGTATTATGGGATGACAGAGCCCGGCAAGCATTTGGGAGTGGCCGGCCTCGGCGGCTTAGGCCACGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTGGCTCTCCCAACAAGGAAGCTGAGGCCATTCACACTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGATCCTGAAAGAATGAAGGCTGCCATGGGAACAATGGATTATATCATCAGCACGATTTCWGCCGTCCATCCGCTGGCTCCCCTGCTTGGTCTGCTGAAGCTGAACGRAAAGCTGGTCAATGTAGGGCTGCCTAGCAAGCCGCTTCAGCTTCCTATCTTCCCCTTGGTTGGAGGAAGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGCAAAGCATAACATAACTGCAAATATTGAGCTGATTAAGATGGATGAGATCAACACTGCTATCGAAAGGCTCAGCAAATCCGATGTTAAATATCGCTTTGTTATTGATGTTGCAAACTCCTTATCTTCCAGTAACATGTAG 1065 0.4732 MGSSNAFGWAATDTSGHLSPFHFSRRENEADDVTLKILFCGVCHSDLHTIKKDWGFTTYPVVPGHEIXGIVTKVGSNVTKFKEGDRVGVGVIVDSCKECECCQQDLENYCPRTVYTYNSPYKGTRTQGGYSDFVVVHQRFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISGSPNKEAEAIHTLGADSFLLSSDPERMKAAMGTMDYIISTISAVHPLAPLLGLLKLNXKLVNVGLPSKPLQLPIFPLVGGRKLIGGSNFGGLKETQEMLDFCAKHNITANIELIKMDEINTAIERLSKSDVKYRFVIDVANSLSSSNM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1628 354 SMART PKS_ER_names_mod 16 343 IPR020843 GO:0016491
Amo05g1628 354 Pfam Alcohol dehydrogenase GroES-like domain 31 142 IPR013154 -
Amo05g1628 354 Gene3D - 159 315 - -
Amo05g1628 354 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Amo05g1628 354 SUPERFAMILY GroES-like 13 177 IPR011032 -
Amo05g1628 354 Gene3D - 9 345 - -
Amo05g1628 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 313 IPR036291 -
Amo05g1628 354 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 351 - -
Amo05g1628 354 PANTHER ALDEHYDE REDUCTASE 4 351 - -
Amo05g1628 354 CDD CAD1 7 344 - -
Amo05g1628 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1628 Amo-Chr5 30715829 30719122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1628 4 349 Monolignol Biosynthesis Gene Families AT2G21730 71.633 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1628 K00083 - gmx:100819684 580.096