Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1590 ATGGGGAAGGGAAGAAGTCCTGGTAAATGGATCAAGAATTTTATCTTGGGAAGGAAATCATCATCAAAGTCTAATTCCTCAAAGAAAAATAATATTTCTAAACTAAATAAGAATGACGTGCTGGGCTCTTCTGAGGTATCTGTGTCCGATCCAACTGTGGATTCTTTGGTGATATCGGCACCAATTTCTGGAGCTAATGCTAATAATGGAGTACTTTCAGAGAAGAACAAGTCATCCACTGAAAGGGATATCCTTTCAACTGGGGGTWGAGAGTCGYGTWCACAAGCTGATGGTGCTTTCGGATCTCAAGGGGATCATGAGAATCCCAAGCTTACAGAAGCYGCTATAAAAGTCCAGGCTGCTTGCAGAGGCTATCAGGCTCGTCGAACATTTCAAATGCTCAAAGGTATCATACAGCTGCAAGCTCTTATCCGTGGCCAGTTGGTTAGAAAACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAGTTTCAAGCTTTGGCTCGTGGTTACATTGTTAGGCATTCAGATATTGGGCTTGAAGTCCTTAAAATTCGTAAGGATGCCCAAAATTCAAATTCTATTCAMGTGGCTACATCTACCCAGGCTGAGAAGCTGCCAGAAAGTGTCTTTGTTTGCAAGCTTCTGGCTTCATCGGGCTCTGTGGTTCCATCATCTCTCAGTTGTGATCCTAATGAACCTAACTTAGCTTGGAAATGGCTTGACCRYTGGACAAGGTACTTTTYRGCCCCTCTTCAGGGTGTKAAGAAGAAACTTGACCCGGTCTCTGATGAGAAAAGTTGCAGTAATCAAGCAGTTAAAAGGAAGCAAGTCAAAAGAACTACACAGAAATCCCCTACAGTGAAAGCTGATGATGGCACAATTTCAGGTTCTSACAAATATAAACAGCGTCCGAAAAAGGATTTGAACAGCCCATCAATTTCAGCTCAGGAAAATACGCAAAAGGAAGCAGAGAAAAATAGTTTGAAAAAAACTCGCCTGCAGAATGGTTCAGATAGATCTGAGGTGGTTRCTGAAAAAAGAAAACAAAGTACTAAAAGAAGTTCAGAGCATACTGTTGCTGATGTTTCAGAGCAGGTGTCAAGCGCCTCTTCGGAGAAAATGAAAGATTCAACACTGTCAAAGTCTAAAGAGTCAGAAGCAAAGAAAAGTCTTGGTCAACCAGAAGAAGAGAATCMTGATACTGAGCCGAATAGTCTTGAGAAATCTTGCATGCAGAATGTTGTAGATAGATCTGAGGGTGTTAATGAGAAACAAAAGCACAGTAGTAAAAAYGTTTCAGATGATATTGTCGATCCGGGCRCAACAGCCTCTCCCGAGAACAAGATAGATTCGACAGTRTCAAAGCCTAAAGAATCTGATCCCGAGAAATGTCTCGGACAAAAAGAAGACAAGCTCGATAATGAGCCACGTAGTCCTGAAAAAATTGTCAGTCAGAATGCTGAAGATAGAGCTGATAGTGACAATGAGAAAAGAAAACACAGCGCTATGAAAGACTCAGATCATACTGTTAGTGATGTATTGGAGCAGGGCACAAATGCTACACCAGAGAAAAAGAAAGATTTGGCAGTCTCAAAGCCTAAAGAATCTGATCCTGAAAAAAGTATTGGACAAGAAGATCAACATGTTAGGGAGCCTAGTAACCCTAAAAAATCTCATGTTCAGACTGTTGTGGATAGATCTGAGATTGTCCATGAGAAAAGAAAACACAGCACTAAGAAAATCTCAGACCATACTGTTGCTGATGTATCAGAGCAGGGCACAAGTGCCTCTTCTGAGAAAAGGAAAGCATTAAAAGTGTCCAAGAACAAAGAGTCCAATCCCGAGAAAAGTATTGGACAGAAAGCAGGAGGCAAGCATGATATTGAGCCGCATAACGATCTTATTACTGTCTCGCAGACTACTATAACAAATGGTATAAATACAGAAAATCGAGGAGCTGGTGAGGACTTGAATGCTGGTGATGGTTATATTGGTAACAATTGCCAGAGAAGAGCTTCCCTCCCTGCTAATTTCAGTGATCAGGATAGTGAGTTRCACAGCACTCCACGGCTGCCCAGTTATATGGCCCCGACTGAATCGGCAAAGGCTAAGCTACGACCACAAGGCTCCCCAAGGTTYGCTGCTGATCTGTTAGACAAAAATGCTATGACCAGGAGGCATTCGCTTTCATCTTCGTTTAATAGCAAGTCAGGTTCATTTTCTCCCAGAGCAGAAAGATTGGTAGCCTTGAGCGGCAAAGGAGCACTAAGGACTGATAGATCCCTGTCGTCTTCAAGGGATGTGACAGATAAGTTGATCCAACCTCAATGGAGAAGGTGA 2349 0.4189 MGKGRSPGKWIKNFILGRKSSSKSNSSKKNNISKLNKNDVLGSSEVSVSDPTVDSLVISAPISGANANNGVLSEKNKSSTERDILSTGGXESXXQADGAFGSQGDHENPKLTEAAIKVQAACRGYQARRTFQMLKGIIQLQALIRGQLVRKQAVSALYCVKGIVKFQALARGYIVRHSDIGLEVLKIRKDAQNSNSIXVATSTQAEKLPESVFVCKLLASSGSVVPSSLSCDPNEPNLAWKWLDXWTRYFXAPLQGVKKKLDPVSDEKSCSNQAVKRKQVKRTTQKSPTVKADDGTISGSXKYKQRPKKDLNSPSISAQENTQKEAEKNSLKKTRLQNGSDRSEVVXEKRKQSTKRSSEHTVADVSEQVSSASSEKMKDSTLSKSKESEAKKSLGQPEEENXDTEPNSLEKSCMQNVVDRSEGVNEKQKHSSKNVSDDIVDPGXTASPENKIDSTVSKPKESDPEKCLGQKEDKLDNEPRSPEKIVSQNAEDRADSDNEKRKHSAMKDSDHTVSDVLEQGTNATPEKKKDLAVSKPKESDPEKSIGQEDQHVREPSNPKKSHVQTVVDRSEIVHEKRKHSTKKISDHTVADVSEQGTSASSEKRKALKVSKNKESNPEKSIGQKAGGKHDIEPHNDLITVSQTTITNGINTENRGAGEDLNAGDGYIGNNCQRRASLPANFSDQDSELHSTPRLPSYMAPTESAKAKLRPQGSPRFAADLLDKNAMTRRHSLSSSFNSKSGSFSPRAERLVALSGKGALRTDRSLSSSRDVTDKLIQPQWRR* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1590 782 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Amo05g1590 782 Gene3D - 108 180 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 454 514 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 407 421 - -
Amo05g1590 782 Pfam Protein of unknown function (DUF4005) 684 760 IPR025064 -
Amo05g1590 782 ProSiteProfiles IQ motif profile. 133 162 IPR000048 GO:0005515
Amo05g1590 782 SMART iq_5 110 132 IPR000048 GO:0005515
Amo05g1590 782 SMART iq_5 133 154 IPR000048 GO:0005515
Amo05g1590 782 SMART iq_5 158 180 IPR000048 GO:0005515
Amo05g1590 782 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 548 779 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 636 654 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 1 46 - -
Amo05g1590 782 Pfam IQ calmodulin-binding motif 161 176 IPR000048 GO:0005515
Amo05g1590 782 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Amo05g1590 782 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Amo05g1590 782 MobiDBLite consensus disorder prediction 268 717 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 673 691 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 310 324 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 17 46 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 363 378 - -
Amo05g1590 782 PANTHER IQ-DOMAIN 5-RELATED 548 779 - -
Amo05g1590 782 PANTHER IQ-DOMAIN 5-RELATED 1 410 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 604 635 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 68 107 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 760 774 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 422 436 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 731 782 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 325 362 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 379 399 - -
Amo05g1590 782 MobiDBLite consensus disorder prediction 522 589 - -
Amo05g1590 782 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1590 Amo-Chr5 28463811 28468210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1590 664 782 IQD Protein Family AT1G14380 42.857 1.56e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1590 - - aip:107643525 1439.48