Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1577 ATGATGAAGAAGTTCTTGGTTTCTTTTTATTTCTTGTTCCCTGCAACAATTTCAATCATTCTTGTGCTTCTAACTCCAATTCCAAGTGCACAGTTAACACCAACTGAAAGCGGAATCCTCCTCCAAGTTCAGAAGCTACTAGAATACCCYGAAGCTCTTCAACCATGGAACAACTTCACCACCAACTTCTGCTTCCTCCYTCCATCATCASCCCTCAAGATTCTCTGCTCCAATGGCCATGTAACAGAATTAACCATTATTGGAAACAGAGGTTCTTCTTTGAGTCATCATCATCAAGATCAAGAAGCTCCTACTCTTTCTGAAAGATTCTCAATTCATGASCTTTTAGTTCTGCTGTCAAGGCTTTCAAATTTGAAGGCTTTGTCTTTGGTTTCACTTGGTCTGTGGGGTCATTTACCATCTGAGATTAACCGGTTCGGATCAATCAAATCCATGAATTTAAGCTCAAACTTCATCTATGGAAAAATCCCATCATCAATTTCTTCTATGAGGACACTTAAGAGTCTTGTTCTTGCTCATAATCTCCTCAATGGAACTATACCTGATCTAACAATGCTATCTTCTCTTCAAGAACTCGACTTGGGCTTCAATGGTTTCGGCCCAGAGTTCCCTTCATTGAGCAAGAACATTGTGAAGATTATCTTAAGAAACAACTCTTTCACATCCCAAATTCCTTCAGAACTCATCAAATTTCAAAGGCTTCAACAATTTGACATCTCTAACAATGGAATTTTCGGAACCATTCCTTTGTTTTTGTTCTCTCTTCCTTCTCTTCAGTACTTAAACTTGGCATCAAACCAATTAAGCGGCTCACTCTCTCTGAACACAAGCTGCGGTTCTGTTCTAACTTTTGTTGATGTCTCATACAACCTTTTAACAGGAAACTTGCCATCTTGCTTCACTTCGAAGTCATCGAATCGAACGATAATGTATTCGAGGAATTGTGTCTCAGCAATGAGATTGAGTGATCAGTATCCTGCTTCATATTGCGAGGGAGTGATGGAAGCCTTGACGGCTAAATCACCAGGTCGAAGCCGGAAGGAGGAGTCAGAGATTCATCTAGGCCTAGTTCTTGGTGTTCTGGGAGTTGCTACAGGAGTGGCTGGGCTTGTGGCTCTTCTCATTCTGTTCATCTTGAAGAAGAACAAAGCAAAAAGTGCCGAAAAGGATATCATTGATAACAAATCTGCTGCTGATAAATTTCACATCAATCTATATCCAGGACCAAAAATTGTTGCAAGATGTGCTACTGAAAGAATGAGTCTAGCAGCACTTGGATTGCCACCATATTGCAATTTCACATCAGATGAAATTGGAGATGCAACAAACAACTTTCGCCAATCAAATTTAATAGGAGAAGGAGCACAGGGACAGCTATATAAGGGCAAGCTCGTGGATGGTTCAATGGTCCTTGTTAACCGTTTAAGGGTAAAGCAGAAGAGTTTGAACAGCAACAGTATGCAGAACTTGAAGAAGGTGTTGCCAAATTTAAGGCATAGGAATTTGGTTAGTGTTTTAGGACATTGCTTCATTACTTGTCAGGACCATCCCCAAACTAGAAGCACAATCTTCATTGTATTTGAGCACATCCCAAATTTGTCATCCTTAAGGGACCATCTTACAGATAGGATAAGAAGGGAAACGCTGAAATGGCCACAAAGAATGGCAATAAGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACACAGGARTTACTCCKGGCATCTATGGCAACAATTTAAGGATTGAGAACATTCTGTTAGATAATAGTCTCAATCCAAAAGTCAGTGGATACAGTATTCCATTGCCATCAAAGAAAGGCGTTGATAGGAGACAGAATCAACAATGTGTTCCCAGTGTTAGTGGCAGATGCAGCAATGAAGAAAAGGAAGATATATTTCAGTTGGGTGTCATTCTAATTCAAATAATCACTGGCAAGCTAATTACATCTTCAGGTGAATTAGAGGAGCTAAAAGATGAGTTGGAGAGAGGTTTGTCAGAAGCTGCATCATCAACACCAAGGCTCACAGTTGATCCTTCCCTCAGGGGAATTTTTGTATATGAATCTGTGAAAACTGCACTTCAGATCACCATCAATTGCCTCAGCAAGGTCACTATTAATCGCCCTTCAATAGAGGATGTTCTTTGGAATCTGCAGTACTCAATGCAAGTTCAAGAAGCCAGGAGCAGCAGTGGGAATAGTCCAAGATTGTAA 2238 0.4035 MMKKFLVSFYFLFPATISIILVLLTPIPSAQLTPTESGILLQVQKLLEYPEALQPWNNFTTNFCFLXPSSXLKILCSNGHVTELTIIGNRGSSLSHHHQDQEAPTLSERFSIHXLLVLLSRLSNLKALSLVSLGLWGHLPSEINRFGSIKSMNLSSNFIYGKIPSSISSMRTLKSLVLAHNLLNGTIPDLTMLSSLQELDLGFNGFGPEFPSLSKNIVKIILRNNSFTSQIPSELIKFQRLQQFDISNNGIFGTIPLFLFSLPSLQYLNLASNQLSGSLSLNTSCGSVLTFVDVSYNLLTGNLPSCFTSKSSNRTIMYSRNCVSAMRLSDQYPASYCEGVMEALTAKSPGRSRKEESEIHLGLVLGVLGVATGVAGLVALLILFILKKNKAKSAEKDIIDNKSAADKFHINLYPGPKIVARCATERMSLAALGLPPYCNFTSDEIGDATNNFRQSNLIGEGAQGQLYKGKLVDGSMVLVNRLRVKQKSLNSNSMQNLKKVLPNLRHRNLVSVLGHCFITCQDHPQTRSTIFIVFEHIPNLSSLRDHLTDRIRRETLKWPQRMAISIGIARGIQFLHTGXTPGIYGNNLRIENILLDNSLNPKVSGYSIPLPSKKGVDRRQNQQCVPSVSGRCSNEEKEDIFQLGVILIQIITGKLITSSGELEELKDELERGLSEAASSTPRLTVDPSLRGIFVYESVKTALQITINCLSKVTINRPSIEDVLWNLQYSMQVQEARSSSGNSPRL* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1577 745 Gene3D Ribonuclease Inhibitor 214 338 IPR032675 -
Amo05g1577 745 Pfam Protein kinase domain 453 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1577 745 PANTHER OS07G0166700 PROTEIN 4 738 IPR045272 GO:0004714|GO:0006468
Amo05g1577 745 SUPERFAMILY L domain-like 119 324 - -
Amo05g1577 745 Gene3D Phosphorylase Kinase; domain 1 417 523 - -
Amo05g1577 745 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 4 738 - -
Amo05g1577 745 Gene3D Ribonuclease Inhibitor 34 213 IPR032675 -
Amo05g1577 745 SUPERFAMILY Protein kinase-like (PK-like) 433 726 IPR011009 -
Amo05g1577 745 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Amo05g1577 745 ProSiteProfiles Protein kinase domain profile. 452 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1577 Amo-Chr5 27820536 27825318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1577 30 666 Miscellaneous Gene Families AT2G02780 46.818 3.67e-159 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Amo05g1577 Pkinase 9.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1577 - - adu:107489186 1397.1