Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1546 GCCACCGCCACCTCCGTCCAACCACCGCTGCCGTCGCAACTTCCAACTTTGAACAGCCACCGCCTGCTCCCTCACTTCCCTTCCTTCGCGCAGCAAACGTCGCAAACTTCCTTCCCTCCATCGCGAAGCCACCGCTCGATCGTTAAAGCCTCCATCGCGCAGCCACTGTCTTGCCGCGCCAGCTCTGTTCCACCGCGCCTGTCCCTTCAGCGGCGTCTGCTCTCCTGTAATATTGATATTGGAAACATTGCAAACATTGAAAACATTGCTGATGGGCAATATCATGTGCAAACATTGTATGAACCGATCGGTGTTGCTGGTCAGATTATTCCCTGGAATTTCCCTCTTCTCATGTTTGCTTGGAAGCTTGCTCAATATGTTTCAGTTCCTCCTAGGCTGAGCCAACATACTGAGCATGACAGATTCATGTTATGA 435 0.5195 ATATSVQPPLPSQLPTLNSHRLLPHFPSFAQQTSQTSFPPSRSHRSIVKASIAQPLSCRASSVPPRLSLQRRLLSCNIDIGNIANIENIADGQYHVQTLYEPIGVAGQIIPWNFPLLMFAWKLAQYVSVPPRLSQHTEHDRFML* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1546 144 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 87 125 - -
Amo05g1546 144 SUPERFAMILY ALDH-like 91 125 IPR016161 GO:0016491
Amo05g1546 144 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 87 125 - -
Amo05g1546 144 Pfam Aldehyde dehydrogenase family 92 125 IPR015590 GO:0016491
Amo05g1546 144 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 128 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1546 Amo-Chr5 26750532 26752073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1546 90 124 Aldehyde Dehydrogenase Gene Family AT3G48000 82.857 5.81e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1546 K00128 - ahf:112803305 123.635