Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1537 ATGTGTTGCAATAATCAGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGTTTGGGAAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTTCTTTAGCACAGGCCAGGCAGAGAAAAGTCAGTGCAAACACCTATCTATTATCTTTCATTTGCTTCTTTCTTTTTCTAGTTGTTGATGCCAATATAGACTATAATGCTCGGGAAGGGAGGAGCATAGCAGAGGTGAGCACCTTAATCTCTATAGCTGACAGAGGGTTTTGGTAG 327 0.4251 MCCNNQSWYQEVSKLKAKYESLQRTQRHLFGKDLGPLSIKELQNLEKQLEGSLAQARQRKVSANTYLLSFICFFLFLVVDANIDYNAREGRSIAEVSTLISIADRGFW* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1537 108 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL6 ISOFORM X1 5 61 - -
Amo05g1537 108 Coils Coil 39 59 - -
Amo05g1537 108 ProSiteProfiles K-box domain profile. 5 99 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo05g1537 108 Coils Coil 5 25 - -
Amo05g1537 108 Pfam K-box region 5 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo05g1537 108 PANTHER MADS BOX PROTEIN 5 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1537 Amo-Chr5 26344721 26345989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1537 6 61 MADS-box Gene Family AT2G45650 64.286 2.04e-18 75.5