Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1512 ATGAGGTATTCTGACACGGATTTTCTTAACAAGGAACAGAATAATGGAAGATCAAGAGATGAATTTGCTCTTACCATGCCTGATGGAAGAGAAATTGCCATTAAAAGGTTGTACTTCAACAACAGGCATAGATTAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAGCACAAGAATCTTGTGAGGTTGTTAGGATGCAACTGTTCTGGACCCAAAAGCTTGCTCAGTCAAGGGAAGATATTAAGTTGGGAGAAGAGATATGACATTATCATTGGGACAGTTGAAGGATTGGTTTACCTCAACATCTTATCGAATGCTAAACTTTGTGCCAAAATTGCTGATTTCGGACTGGCTAGGTCCTATCAAGAAGATAAGATTCACATTAGCACAGCTATAGCTGGAACACTGTAA 420 0.3881 MRYSDTDFLNKEQNNGRSRDEFALTMPDGREIAIKRLYFNNRHRLADFYNEVNIISSVEHKNLVRLLGCNCSGPKSLLSQGKILSWEKRYDIIIGTVEGLVYLNILSNAKLCAKIADFGLARSYQEDKIHISTAIAGTL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1512 139 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 139 - -
Amo05g1512 139 SUPERFAMILY Protein kinase-like (PK-like) 25 138 IPR011009 -
Amo05g1512 139 Gene3D Phosphorylase Kinase; domain 1 2 76 - -
Amo05g1512 139 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 25 139 - -
Amo05g1512 139 Gene3D Transferase(Phosphotransferase) domain 1 77 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1512 Amo-Chr5 23915270 23916494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1512 26 139 Receptor kinase-like Gene Family AT1G70520 59.864 5.30e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g1512 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1512 - - aip:107631343 179.489