Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1466 GAACGACAATCCAGCTCCGGCGGGGGATCCGCCGTGGCCATGCCGGGAACGCAGGTGGGTGTTCCGCTGCAGCAGCAGCAGGCGGCGGTTGCAGCGGTGGCGGAGAAGAAGAAGAGGGGTCGACCCAGGAAGTACGCACCAGACGGGTCGGTTACTATGGCAATGTCTCCGAAGCCGATTTCTTCTTCGGGTCTGCCGGCGATGATCGATTTCTCTTCGGGAAAGCGCGGGAAAGTGCGGCCACCTGGCTCTGTCAGCAAAGCCAAGTTCGAGGTTGAGAATATAAGTACAATGAAGAAAACCTCTTGCTTTCCGCCTTTTATATTTGTGTTTTTGAATTTGGCTTTCACTGTTAACTGTGTAAACTGTAAAGCGAGTGGGTTGGATGCTCGTCAATCGGTGCTAATTTTACCCCCCATTTCATCACTGCTAATTCCGGGGAGGTGCGATGTTACCATGAAGATAATATCGTTTTCTCAGCAAGGACCACGAGCTATATGTATTCTTTCTGCAAATGTAGTCATATCAAGTGTGACACTTCGTCAACCTGATTCTTCCGGAGGTACACTGACATACGAGGGACGGTTTGAGATTCTGTCTTTGAGCGGATCATTCATGCCAAATGATGATGGTGGAACACGGAGCAGATCCGGTGGCATGAGTATTTCCTTAGCAAGTCCGGATGGACGTGTTGTAGGCGGCGGAGTAGCTGGTCTATTGGTTGCTGCAAGTCCTGTGCAGGTAGTGGTAGGCAGTTTTCTCGCAGGCAAGCAACAGCAATCAAACCACAAAAAGCAGAAATTTGAGGTAATATCAACAGCCACGCCACCGGCTGCAGCCGCTGCTCATGCTAATCTCTCAACTTGCTCTTCCTGGAGTAACCCAACTGATATCAGTGTGTCATTTCCTGGAGGC 915 0.5071 ERQSSSGGGSAVAMPGTQVGVPLQQQQAAVAAVAEKKKRGRPRKYAPDGSVTMAMSPKPISSSGLPAMIDFSSGKRGKVRPPGSVSKAKFEVENISTMKKTSCFPPFIFVFLNLAFTVNCVNCKASGLDARQSVLILPPISSLLIPGRCDVTMKIISFSQQGPRAICILSANVVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDDGGTRSRSGGMSISLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGKQQQSNHKKQKFEVISTATPPAAAAAHANLSTCSSWSNPTDISVSFPGG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1466 305 ProSiteProfiles PPC domain profile profile. 134 274 IPR005175 -
Amo05g1466 305 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 267 - -
Amo05g1466 305 MobiDBLite consensus disorder prediction 34 57 - -
Amo05g1466 305 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 253 IPR005175 -
Amo05g1466 305 Gene3D - 144 275 - -
Amo05g1466 305 CDD DUF296 144 230 IPR005175 -
Amo05g1466 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 29 283 - -
Amo05g1466 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 283 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1466 Amo-Chr5 21114839 21116846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1466 36 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.727 2.11e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1466 - - jre:108981856 288.115