Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1464 ATGGATCAGTTGGGTTGTTCTCCTCACTTATTGTTCGCGCATGCAGATCAAGGTTTTGATGTATGGGTAGGAAATGTGCGTGGAACACGCTGGAGCCATGGTCATAAGTCTTATTCAGTGAAGAATAAGGGTAAGCCTCCTGATTGGCAAGACTTTGTTGGTATTATCACTTTGCTTGTCATCAATTCAACCATCAGTTTCATAGAGGAGAACAATGCTGGTAATGCTGCTGCAGCTCTCATGGCTCGTCTCGCTCCGAAAGCAAAGGACTTGCCAACTACTGTGTTTCTGCTGGTGAAGCTTACACAAAGGCACTTGAGGTTGCCAGGAATATCAATGAGAAGTTGGCAATGA 354 0.4492 MDQLGCSPHLLFAHADQGFDVWVGNVRGTRWSHGHKSYSVKNKGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKAKDLPTTVFLLVKLTQRHLRLPGISMRSWQ* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1464 117 PANTHER PLASMA MEMBRANE ATPASE 1 42 91 - -
Amo05g1464 117 SUPERFAMILY Calcium ATPase, transmembrane domain M 40 95 IPR023298 -
Amo05g1464 117 Gene3D alpha/beta hydrolase 5 51 IPR029058 -
Amo05g1464 117 PANTHER CALCIUM-TRANSPORTING ATPASE 42 91 - -
Amo05g1464 117 Gene3D - 52 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1464 Amo-Chr5 21097090 21101731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1464 44 91 Primary Pumps ATPases AT5G62670 97.917 9.60e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1464 K01535 - ahf:112716605 189.504