Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1454 ATGCATATGCGACATGTATCATGCATATGCGGGACCCTTTCTCTGCCCACAATTCTCGCATACGTGGACAATGCATGTGTACGTGACACTGTCTTTTTGCAAATTCTCGCGTATATGGCAGGTAGTGATCTTCTGCAGTTTGATCCTTATCTTGTTGCGAAGCATTTGGAATCAACAAATACAATGTTTTCTTTTATTTGGTGGATTATTGGGTTCTACTGGGTATCAGCTGGTAGTCAATCTTTAGTCAAAGAATCTCCTCTTGTTTACTGGTTTGTGCTCCCTCAGCTTCCCTTGTTCAGCATGCTATGTATAATCTTCCTTGGTTTTGATGTCTTCTTTATTGTATTTTGTGAGAATAAAGGAAGGATAAGAACTAGGTATGCATCTGAAATCGGTCATCAAATGTACTTTTATGTGTATTGCTGGATGGATTTAGTGCCTCAAGTGCTATTGGAAGAAGGAGCATCAAAAGAGGATATTGAGCAGCTATCAAAGTATAAAATTTGGAAAGTTGAAAACAGCGATAAACTTGCTGGAAATACAGGTCATGTTGGAGGAGTAATAACCGAATGCCGATCTGACTCACCTGGTGAACATGTTCTTACTGAGGACAACACG 621 0.3977 MHMRHVSCICGTLSLPTILAYVDNACVRDTVFLQILAYMAGSDLLQFDPYLVAKHLESTNTMFSFIWWIIGFYWVSAGSQSLVKESPLVYWFVLPQLPLFSMLCIIFLGFDVFFIVFCENKGRIRTRYASEIGHQMYFYVYCWMDLVPQVLLEEGASKEDIEQLSKYKIWKVENSDKLAGNTGHVGGVITECRSDSPGEHVLTEDNT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1454 207 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 42 206 - -
Amo05g1454 207 PANTHER TARGET OF ERK KINASE MPK-1 42 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1454 Amo-Chr5 20865723 20874576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1454 50 185 C3H Transcription Factor Family AT1G68070 33.824 1.76e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1454 - - gmx:100790497 162.155