Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1435 ATGATGGCTATTAAGTTAGTAGTCTTTGTCGTCAATGTAATCTTGTTTTTTCCCTCATCACTGTCTCAAAGGTTAGCTAGCGAAGAAGGAAATGAGTTTCGAACATACATTGTTCATGTTAAGAAGCCAGAAAGTAGAATATGGTTCCATTCATCATTAGAAGGCAATAATAACATCAACAATCTCCATAGCTGGTACGAGTCATTCTTGCCATCTTCCACCATTGATACTGCAAGTTTAAATAGCCAAACGCGAATGCTTCATGCATATCGACACGTTGGTTATGCTTTTGCAGCAAGACTTACCAAAGATGAAGCACTGCACATGGCCAACAAAGATGGTGTTCTCATGATTCGCGAAGAAAAGATGCTGCAGCTGCAAACAACTCACACTCCTGCCTTCTTGGGACTGCACCCAGAAGAAGGCCTTTGGAGAGAGACCAACCTTGGGAAAGGTGTGATCATTGGAGTTTTTGACACCGGAATATCGCCTTCTCATCCTTCCTTCAACGACGAAGGAATGTCGCCGCCACCGGCTAAGTGGAAAGGCAAGTGTCACTTTAGAAAAGGCTGCAACAACAAAATAATTGGGGCAATAACCACCGTCGGGTCCACTTATATGTCTGAGGCCGCGCCCGTACCACCTTTCGATGACATCGGGCACGGCACCCACACTGCCAGCATAATTGCTGGCAGTTTTGTGAAAAATGCTAATGTTCTTGGCCATGCCAACGGAACTTCTGTTGGCATGGCTCCTCATGCTCATTTAGCCATTTACAAAGCGTGCAGCATGATTGGTTGCAGTGAAGGTTCTGTTCTAGCCGCATTCGATGCTGCAATTAACGATGGAGTTGACATTATCTCTGTTTCCTTAGCCGGAGAGTCTAAATTGTTCTCCGAAGATGCCATGTCGATCGGTAGTTTTGGAGCAACACAGAAGGGGATTCTTGTCACCATTGCAGCCGGTAATGAAGGTCCTGAATCAAGCACGGTTGTGAACGATGCTCCATGGATATTTACCGTAGGAGCAAGCACTATGGATCGACGAATAGTAGCATCAGTCAAGCTTGGAAATGGTGCAGAGTATGATGGTGAGTCTCTTTACGAATCAAAACTATTCAAGAATGATTACAACCCTCTGGTTCATCTTAATGGAGCACCCTGTAACAAAGGTCTATTAGAGAGTATGAAAGTGGAAGGAAAGATCGTGGTGTGTGTTAACGGGAAGAACACAATGAAGTATAAGCAAGCAGAAGCCGTAAAAAGTGCTGGTGGTGCTGCAATGATTCTCGCCAATAGTGATCCATGTGGATATACCCTTTCAACTGAAGAAACGTACCCTCTTCCTGTTACACATGTGAGCCATGCTTCAGGGTTGCAAATCATGCGCTACATAGACTCATGCAAGGACCCTAAGGCCACAATATTGTTCAAAGGAACTATCACAGGCAACACGTCTGCACCCGTTGTTGCTTCATTCTCATCAAGAGGCCCGAGCAGGCAATGTCCTGGGCTTTTAAAGCCTGACATTATAGGGCCCGGAGTGAATGTTCTAGCTTCTTCGGCCGATTGGAGAACTAGCTACAATGGAAGACCACCAGCTTTCTCAATCATGTCAGGCACATCAATGGCTTGTCCTCACATAAGTGGCGTTGCTGCATTGCTTAAGAGCTCTCACCCTCATTGGTCACCTGCTGTTGTTAAGTCTGCAATCATGACCACGGCATACACAACAAACCTTCAAGGTGATCCCATTCCTGACGAGAAGTTACGTCCTGCGAGCTTGTTCGCCATTGGAGCCGGCCATGTCAACCCTTCCAAGGCCGAAGATCCTGGACTGGTTTATGATATTATGCTTGATGATTACGCTGCTTATTTATGTGGATTGGGTTTCACCAGCACAATGGCTCAGCTGGTTACGCATAAGCCTGTGAATTGCGACCTGATAAAAAAGATTGAGGCTACAGAGTTGAACTATCCTTCCTTCTCGATTGTGTTGGGATCTGCTGATTATTTCCCTAAGACCTACAACAGAACTGTTATGAATGTTGGTCCAGCTGATTCGCATTATATTGTGGAAGTTGTTCCCCCGGCCAGTGTACATGTTAGCGTGGAACCGCAGATTCTTGTGTTCAACGGCGAGCAACAGACGGCGAGGTACTCGGTGACGTTTACTCGGAAAACAGGAGAAACTATTAGTGCTTCATCTACGGCGCAAGGTTTTATAGAGTGGGTTTCTGATAAGCATTCCGTGAGGAGTCCCATTGCTGTTATTTTCACTTGA 2283 0.4569 MMAIKLVVFVVNVILFFPSSLSQRLASEEGNEFRTYIVHVKKPESRIWFHSSLEGNNNINNLHSWYESFLPSSTIDTASLNSQTRMLHAYRHVGYAFAARLTKDEALHMANKDGVLMIREEKMLQLQTTHTPAFLGLHPEEGLWRETNLGKGVIIGVFDTGISPSHPSFNDEGMSPPPAKWKGKCHFRKGCNNKIIGAITTVGSTYMSEAAPVPPFDDIGHGTHTASIIAGSFVKNANVLGHANGTSVGMAPHAHLAIYKACSMIGCSEGSVLAAFDAAINDGVDIISVSLAGESKLFSEDAMSIGSFGATQKGILVTIAAGNEGPESSTVVNDAPWIFTVGASTMDRRIVASVKLGNGAEYDGESLYESKLFKNDYNPLVHLNGAPCNKGLLESMKVEGKIVVCVNGKNTMKYKQAEAVKSAGGAAMILANSDPCGYTLSTEETYPLPVTHVSHASGLQIMRYIDSCKDPKATILFKGTITGNTSAPVVASFSSRGPSRQCPGLLKPDIIGPGVNVLASSADWRTSYNGRPPAFSIMSGTSMACPHISGVAALLKSSHPHWSPAVVKSAIMTTAYTTNLQGDPIPDEKLRPASLFAIGAGHVNPSKAEDPGLVYDIMLDDYAAYLCGLGFTSTMAQLVTHKPVNCDLIKKIEATELNYPSFSIVLGSADYFPKTYNRTVMNVGPADSHYIVEVVPPASVHVSVEPQILVFNGEQQTARYSVTFTRKTGETISASSTAQGFIEWVSDKHSVRSPIAVIFT* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1435 760 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Amo05g1435 760 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 31 758 - -
Amo05g1435 760 CDD Peptidases_S8_3 124 576 IPR034197 -
Amo05g1435 760 Gene3D - 626 759 - -
Amo05g1435 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 758 IPR045051 -
Amo05g1435 760 Gene3D Peptidase S8/S53 domain 152 622 IPR036852 GO:0004252|GO:0006508
Amo05g1435 760 Pfam Peptidase inhibitor I9 35 126 IPR010259 -
Amo05g1435 760 CDD PA_subtilisin_like 353 475 - -
Amo05g1435 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 127 IPR037045 -
Amo05g1435 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Amo05g1435 760 Pfam Subtilase family 150 589 IPR000209 GO:0006508|GO:0008236
Amo05g1435 760 ProSiteProfiles Serine proteases, subtilase domain profile. 123 609 - -
Amo05g1435 760 SUPERFAMILY Subtilisin-like 126 613 IPR036852 GO:0004252|GO:0006508
Amo05g1435 760 Pfam PA domain 394 461 IPR003137 -
Amo05g1435 760 Gene3D - 347 482 - -
Amo05g1435 760 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Amo05g1435 760 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Amo05g1435 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1435 Amo-Chr5 20596601 20598883 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1435 9 757 Subtilisin-like Serine Gene Family AT1G04110 40.506 5.00e-179 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1435 - - adu:107488103 1511.89