Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1427 ATGTCTTCTGATAGTGCAAAGGAAAATGCATCCGTAGTTGATTCTTCGCTCACTGAATGGAAGCATGACATTGGAAATTCAGATGACCCAGGTATGAGTATGACAACTGGAACTGGAGTGGAAAGCATATATAATACAAAATATTTTATCATTAAGAGTTTAAATCATCAAAACATCCGTTTATCAGTTGAGAAAGGAATTTGGGCTACTCAAGTCATGAACGAACCCATTTTGGAAGAAGCTTTTCATAATTCAGATAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGCTGCTTCCAAGGATATGCACAAATGACTTCCTCCATTGGGTGGAGGAGAGATAATGTTTGGAATGAGGGTAGTGGTAAGGGTAATCCTTGGGGTCGCAGTTTTAATGTCAAATGGCTGCGTTTAAATGACCTTCCCTTTCATAAGACTCTTCATYTGAAGAATCCCTTGAATGACTACAAACCTGTCAAAATTAGTAGAGATTGCCAGGAGTTATCACCAGATATTGGTCTTGCTCTTTGTGAACTCCTTGACGGTAAAAACGAGGTGGATGGCCTGCTGAYGAGTTCATCCACAGATGATTTATATTGGAAAGGGCATCATTCAAAGACATCAGGGGGTTTTGYGGGAGGTGAAGACTATAACTTCCATCCACTCCATTTATCATGGTCAATGTCCCTGCCATACTCTTCCATGCTTTACCAAAATCAAGCTGAGTTAAGTCAATTTCATTCAGCAAGCAATAGATTCAGTGGGACAACAATCACCAAAAGATTGCCTACCACCACTGTGTCATCAAAAGTGTCAGGGACTAAACATGCTCGTTTTAGTTCCTTAACAGAAGATGATTTTCTTGACATGTCCTATGAAGAATACTTGGAGATCCATAGCAGATGCAGGAAACGATTGTGCCTCAGTGCTGCTCAACCATCTTTCAAACAGACGGAATCATTGAGAAGTAATTCGCATGGTGATTATAGATGTAGTATTCCTCAGGGTGAGGATTCTCTTWAATATGACGACTTGCATGGATGGTACAACTCACTTCTACCAGAKAGTGCCAAGACTCAGAACCAGCAGCGCCTTGTTTTCTCATACCGAAACGTGGTGTCTGGATTTGCTGCGAAACTGACAGCAGAAGAAGCAAAAAGCATGCAAWGGAGGGAGGAGGTTGTGTCGATTCGRGCCGAAAGGATCCTTTCTTTACACACAACTCATAGTCCAGGCTTCATGGGATTGCAAACTGGATTCCCATTGTGGAGAGGCTCCAACTATGGCAAAGGCATCATAGTTGGAGTGTTGGACACAGGAATAAACCCTTCACATCCATCATTTTCTGGTGAAGGAATGCCTTCTCCACCGGCAAAATGGAAGGGCCATTGCGAGTTTACAAAGCAGAGGACTTGTAACAACAAGCTCATTGGGGCAAGAAGCTTTGTCAAAAACTCAAGCAGGGATCTTCCTTTCGATGATGTTGGCCACGGCACTCACACGGCCAGCACGGCCGCAGGGAGGTTTGTGCAGGGTGCAAGTATCTTTGGCAAYGCTAACGGTACAGCTKCTGGCATGGCACCCTTTGCCCATTTAGCAATTTACAAAGTTTGCCAACTTGATGGTTGCTATGAAAGTGCAATCATAGCTGGTATGGACGCTGCCATTGAAGATGGCGTGGACATACTTTCCCTCTCTCTTGGAGGACCCCCTTTTGAATTCTTTGAAGATYCAATTGCATTGGGCGCCTTTGCAGCCATTCGCAATGGCATTTTTGTTAGTTGTTCAGCTGGGAATGAAGGTCCTGGCKATAGTACATTGTCCAATGAGGCTCCATGGATTCTCACYGTTGGTGCTAGCTCCATTGACAGAAAAATAAGTGCATCAGCCAAACTTGGCAATGGAAAAGAATTTCATGGGGAATCAGCATTCCAACCCAAGGACTTTGCACCAAYWCTATTGCCACTTGTKTATGCAGGAGAAAATGGAAATGAATCTTGTGCATTCTGTGCTCCAGGATCATTGGAGAGTGTGGATGTTCAGGGTAAGGTAGTRTTGTGTGAGATAGGTGGAGATATTGCAAGAATAGACAAGGGACAAGAAGTTAAGAABGCTGGTGGTGCTGCCATGATCCTCATGAACAGTGAGATTAGAGGTTATACTACCCTTGCTGACCCTCATGTTCTTCCTGCAGCACATGTGAGTTACCASGCTGGATTAGAAATCAAGGAATATATAAAYTCAACCTCAGCACCAACAGCAACAGTCTTGTTTAGAGGAACTATCATCGGAGATCCAKTTGCCCCAGTTGTTGCTTCCTTTTCCTCCAGAGGTCCRAACAATGTAAGTCCAGGGATTCTGAAACCAGACATAATTGGACCAGGATTGAACATTCTTGCTGCATGGCCTGTTTCTTTGGACCACGCTTTTCCACCAATGAACATGATTTCAGGTACTTCAATGTCTTGCCCTCATCTCAGTGGCATTGCTGCTTTGTTGAAGAACTCTCACCCAGACTGGTCCCCAGCTGCCATAAAATCAGCAATAATGACCACTGCTCACARAGCAAACCTTGAAGGTGAACCTATATTGGACCAATGGCTTGAACCAGCTGATGTATTTGCAACTGGCTCTGGACATGTCAACCCTCTCCAAGCAAATGATCCAGGACTCATCTATGATATTGAACCAAACGATTACATTCCTTATCTATGTGGTTTGGGTTACACAGACAAACAAGTTGGTACTATCTTGCAACARAAAGTGAGATGCTCTGAGGTAAAAATCATCWMGGAARCACAACTCAACTATCCCTCATTCTCTATTGAAATGGGGAATACTTCACAGTCCTACACAAGGACAGTGACAAATGTTGGGCCTGCAAATTCGACTTATGTTGTGGAAGTTGAAGYGCCTTTGGCTGTTGAAATGAGCATAAGCCCTGCCACRTTAACATTCCAAGAGGTGAAAGAGAAGCTTACATATCTGGTTGAGTTCATCCCTGAAGATGAAAGTCTCAGAGGGAATAACACTTTTGTTCAGGGCTCTATTAAGTGGGTGTCTCTGTCTGGAGAGTACTCAGTTAGCATCCCTATATCTGTCATCTTCAATTGA 3117 0.4305 MSSDSAKENASVVDSSLTEWKHDIGNSDDPGMSMTTGTGVESIYNTKYFIIKSLNHQNIRLSVEKGIWATQVMNEPILEEAFHNSDSVILIFSVNMSGCFQGYAQMTSSIGWRRDNVWNEGSGKGNPWGRSFNVKWLRLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNEVDGLLXSSSTDDLYWKGHHSKTSGGFXGGEDYNFHPLHLSWSMSLPYSSMLYQNQAELSQFHSASNRFSGTTITKRLPTTTVSSKVSGTKHARFSSLTEDDFLDMSYEEYLEIHSRCRKRLCLSAAQPSFKQTESLRSNSHGDYRCSIPQGEDSLXYDDLHGWYNSLLPXSAKTQNQQRLVFSYRNVVSGFAAKLTAEEAKSMQXREEVVSIRAERILSLHTTHSPGFMGLQTGFPLWRGSNYGKGIIVGVLDTGINPSHPSFSGEGMPSPPAKWKGHCEFTKQRTCNNKLIGARSFVKNSSRDLPFDDVGHGTHTASTAAGRFVQGASIFGNANGTAXGMAPFAHLAIYKVCQLDGCYESAIIAGMDAAIEDGVDILSLSLGGPPFEFFEDXIALGAFAAIRNGIFVSCSAGNEGPGXSTLSNEAPWILTVGASSIDRKISASAKLGNGKEFHGESAFQPKDFAPXLLPLVYAGENGNESCAFCAPGSLESVDVQGKVVLCEIGGDIARIDKGQEVKXAGGAAMILMNSEIRGYTTLADPHVLPAAHVSYXAGLEIKEYINSTSAPTATVLFRGTIIGDPXAPVVASFSSRGPNNVSPGILKPDIIGPGLNILAAWPVSLDHAFPPMNMISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTAHXANLEGEPILDQWLEPADVFATGSGHVNPLQANDPGLIYDIEPNDYIPYLCGLGYTDKQVGTILQQKVRCSEVKIIXEXQLNYPSFSIEMGNTSQSYTRTVTNVGPANSTYVVEVEXPLAVEMSISPATLTFQEVKEKLTYLVEFIPEDESLRGNNTFVQGSIKWVSLSGEYSVSIPISVIFN* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1427 1038 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 435 446 IPR023827 -
Amo05g1427 1038 SUPERFAMILY PA domain 656 777 IPR046450 -
Amo05g1427 1038 Pfam PA domain 656 743 IPR003137 -
Amo05g1427 1038 ProSiteProfiles YTH domain profile. 46 181 IPR007275 GO:0003723
Amo05g1427 1038 CDD Peptidases_S8_3 406 855 IPR034197 -
Amo05g1427 1038 Pfam Subtilase family 430 857 IPR000209 GO:0006508|GO:0008236
Amo05g1427 1038 Gene3D - 624 765 - -
Amo05g1427 1038 Gene3D ph1033 like domains 31 192 - -
Amo05g1427 1038 PRINTS Subtilisin serine protease family (S8) signature 494 507 IPR015500 -
Amo05g1427 1038 PRINTS Subtilisin serine protease family (S8) signature 430 449 IPR015500 -
Amo05g1427 1038 PRINTS Subtilisin serine protease family (S8) signature 818 834 IPR015500 -
Amo05g1427 1038 Pfam Fibronectin type-III domain 935 1035 IPR041469 -
Amo05g1427 1038 Gene3D Peptidase S8/S53 domain 432 901 IPR036852 GO:0004252|GO:0006508
Amo05g1427 1038 SUPERFAMILY Subtilisin-like 406 892 IPR036852 GO:0004252|GO:0006508
Amo05g1427 1038 Gene3D - 905 1037 - -
Amo05g1427 1038 Pfam Peptidase inhibitor I9 344 407 IPR010259 -
Amo05g1427 1038 ProSiteProfiles Serine proteases, subtilase domain profile. 411 888 - -
Amo05g1427 1038 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 324 407 IPR037045 -
Amo05g1427 1038 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 341 1037 IPR045051 -
Amo05g1427 1038 CDD PA_subtilisin_like 632 757 - -
Amo05g1427 1038 Pfam YT521-B-like domain 47 181 IPR007275 GO:0003723
Amo05g1427 1038 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 341 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1427 Amo-Chr5 20524273 20531045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1427 324 1035 Subtilisin-like Serine Gene Family AT5G67360 44.444 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1427 - - gmx:100799902 1056.59