Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1418 ATGGCTCATTTGGTGTACGGTGAAACTCCATCCTTTGGAGGCTCACATCACGGACAACCCCACCAATTTCTTCCATTTCCAACTTCTTCAAGCTCTTTACCCATTTTCCTCTTACATGGCAACTTGGAAATATGGATCCACGAGGCCAAGAACCTTCCCAACATGGACACCTTCAGCAACAAGCTAGGAGGCATGCTTTCCAAGCTCCCTATGAATCTTGGAGGCAAAATAGAAGGCCACGTGTCCCAAAACTTATCCACCAGTGATCCCTATGTCACAGTGTCTGTGTCAGGTGCTGTAATAGCCAGAACCTTTGTCATCAGAAATTCTGAGAACCCTGTTTGGATGCAGCACTTCAATGTCCCTGTTGCTCATCATGCTGCAGAGGTTCACTTCGTTGTCAAGGACAGTGATTTCGTGGGGTCACAGATTATAGGTGCAGTTGGGATCCCAGTGGAAAGGTTAATCGATGGTACAAAAGTTGAAGGCGTTTTCCCTATCCTTAATGCTAGCGGAAAACCTTGTAAGCATGGAGCAGTGTTGAATTTGTCAGTTCAGTACACACATGTTGATAAGGTTGCCCTTTATGGTAATGGTGTAGGTGCTGGTCCTAATTATGAAGGGGTCCCAGACACTTACTTTCCTCTTAGAAAGGGTGGAAGAGTTACACTCTATCAGGATGCTCATGTTCATGAAGGTTTCCTTAACAATTTGGATGCCAATTATAAGCATAAAAGTTGTTGGGATGACATATTTGATGCAATAAGTGAGGCACGTAGATTGGTATATATTGTTGGTTGGTCTGTTTACTACAATGTCAGTTTGATTCGAGGTACTAGAGGTGATGGAAAGGATTGCACTTTAGGTGAACTTCTCAAAGCCAAATCACAGGAAGGTGTGAGAGTTTTGCTCCTTGTGTGGGATGATCCTACTTCCAATAGCTTCCTTGGTCAGAAAACGGTTGGACTAATGGACACTCATGATGAGGACACTCGCCATTTCTTCAAGCACTCTTCCGTACGAGTGCTTCTCTGCCCAAGAGCTGGTGGAAAAGGACATAGTTTGCTTAAAACACAGGAAGCTGGGACTATCTATACCCATCACCAAAAGACTGTCATTGTGGATGCTGATGCAGGGCATCACAAAAGAAAGATTGTAGCTTTCATAGGAGGACTTGATTTATGTGTTGGAAGATATGATACACCAGAACATTCTCTCTTTAGGACTTTGCAGACAACTCACAAAGATGACTTTCATAATCCTAACTTTAAGGGGCCTGTTACTGGGTGTCCAAGAGAACCATGGCATGATTTGCACTCGAGAATTGATGGTCCAGCAGCATATGACATCCTGACCAATTTTGAGGAGCGTTGGTTAAGGGCAATAAAAATGAGCAAACTCCAGAAGATGAAAAGTTCATATGATGATTCATTACTGAAAGTTGATAGAATTGCAGACATTGTTGGGATTGATCAAGTTACTAGCCTTAATGGTGAAGATAACCGTGAGACTTGGCATGTTCAGGTCTTCCGTTCAATTGATTCGAATTCTGTCAAAGGATTTCCAAAGGAACCTAAAGATGCTATAAGAAGGAACTTGGTGTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAGGCAATCAGATCTGCCCAAAAATTCATATATATTGAGAACCAGTATTTTCTTGGATCATCATATAATTGGGATTCTCACAAAGACCTTGGTGCAAACAACTTAATTCCAATGGAACTTGCACTAAAGATAGCCAACAAAATCAAACACCATGAGAGATTTTGTGTGTATATTGTGATTCCTATGTGGCCTGAAGGTATACCGACAGGTACAACTACTCAGCGGATTCTGTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGATTTACAAGGCCTTACAAGAAGCCGGGCTTGACAATGAGTATGAACCACAAGACTATTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGAAAATGAAAATATTGGAAATCCTAGCGGTGAAAACACTCCTCAGGCACTCACCAAAAAGAACAGGAGATTCATGATTTATGTTCATTCAAAAGGAATGATCGTGGATGATGAGTATGTGTTGCTGGGTTCTGCAAACATAAACCAGCGATCAATGGAAGGCACCAGAGACACCGAGATAGCAATGGGAGCATATCAGCCTCATCATACCTGCACAACTAACAGGTCTAAACCCCGAGGCCAGGTCCATGGCTACAGAATGTCATTGTGGAAGGAGCATATTGGAGGAGTGGAAACATGTTTCGAGCATCCGGAGAGCCTTGAATGTGTGAGACGGATTAGGTCGTTGAGTGAGCATAACTGGAGACAGTATGCAGCTGATGAAGTAACCGAATTGAAGAGCCATCTGTTGAAGTACCCTGTTCATGTTGATTCAAAGGGCAATGTGGGATCCCTTCCTGGCTGGGAAACATTCCCTGATCTTGGTGGCAACATTACCGGCACCTTCACACTATTGCAAGAAAATCTCACCATCTGA 2550 0.4267 MAHLVYGETPSFGGSHHGQPHQFLPFPTSSSSLPIFLLHGNLEIWIHEAKNLPNMDTFSNKLGGMLSKLPMNLGGKIEGHVSQNLSTSDPYVTVSVSGAVIARTFVIRNSENPVWMQHFNVPVAHHAAEVHFVVKDSDFVGSQIIGAVGIPVERLIDGTKVEGVFPILNASGKPCKHGAVLNLSVQYTHVDKVALYGNGVGAGPNYEGVPDTYFPLRKGGRVTLYQDAHVHEGFLNNLDANYKHKSCWDDIFDAISEARRLVYIVGWSVYYNVSLIRGTRGDGKDCTLGELLKAKSQEGVRVLLLVWDDPTSNSFLGQKTVGLMDTHDEDTRHFFKHSSVRVLLCPRAGGKGHSLLKTQEAGTIYTHHQKTVIVDADAGHHKRKIVAFIGGLDLCVGRYDTPEHSLFRTLQTTHKDDFHNPNFKGPVTGCPREPWHDLHSRIDGPAAYDILTNFEERWLRAIKMSKLQKMKSSYDDSLLKVDRIADIVGIDQVTSLNGEDNRETWHVQVFRSIDSNSVKGFPKEPKDAIRRNLVCGKNVMIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSHKDLGANNLIPMELALKIANKIKHHERFCVYIVIPMWPEGIPTGTTTQRILFWQFKTMQMMYETIYKALQEAGLDNEYEPQDYLNFFCLGNREIPENENIGNPSGENTPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPHHTCTTNRSKPRGQVHGYRMSLWKEHIGGVETCFEHPESLECVRRIRSLSEHNWRQYAADEVTELKSHLLKYPVHVDSKGNVGSLPGWETFPDLGGNITGTFTLLQENLTI* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1418 849 SMART C2_3c 41 164 IPR000008 -
Amo05g1418 849 Gene3D C2 domain 30 189 IPR035892 -
Amo05g1418 849 Gene3D Endonuclease Chain A 229 483 - -
Amo05g1418 849 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 849 - -
Amo05g1418 849 PIRSF PLD_plant 27 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Amo05g1418 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 363 398 IPR001736 GO:0003824
Amo05g1418 849 Pfam C2 domain 40 167 IPR000008 -
Amo05g1418 849 Gene3D Endonuclease Chain A 498 743 - -
Amo05g1418 849 SMART pld_4 695 722 IPR001736 GO:0003824
Amo05g1418 849 SMART pld_4 363 398 IPR001736 GO:0003824
Amo05g1418 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Amo05g1418 849 Pfam Phospholipase D C terminal 770 839 IPR024632 -
Amo05g1418 849 ProSiteProfiles C2 domain profile. 20 165 IPR000008 -
Amo05g1418 849 Pfam Phospholipase D Active site motif 364 398 IPR001736 GO:0003824
Amo05g1418 849 Pfam Phospholipase D Active site motif 696 722 IPR001736 GO:0003824
Amo05g1418 849 CDD C2_plant_PLD 36 188 - -
Amo05g1418 849 PANTHER PHOSPHOLIPASE D 8 849 IPR015679 -
Amo05g1418 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 190 IPR035892 -
Amo05g1418 849 SUPERFAMILY Phospholipase D/nuclease 533 780 - -
Amo05g1418 849 SUPERFAMILY Phospholipase D/nuclease 209 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1418 Amo-Chr5 20431144 20436665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1418 32 849 Phospholipase D Gene Family (Wang group) AT2G42010 67.176 0.0 1215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1418 K01115 - gmx:100786241 1428.31