Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1404 TTGTCGTTGTCTAGCAACAGACACGGTGGTGATGGAGGTGAGGTTAGGGCATCGCACATACTGGTGAAGCACCAAGGTTCGAGGCGCAAGGCGTCGTGGAAGGATCCAGAAGGCCAGGTCATCAAAAACACCACCAGAGACAGCGACGTCTCTCAGCTAAAGGCCTTGCGTGACGACATCGTTTCTGGCAAAGCCAAGTTTGAGGACATCGCCTCTCGCTTCTCCGATTGCAGCTCTGCTAAGCGCGGCGGCGATCTCGGTCCTTTTGGCCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACTTACGCTCTGAAAGTTGGTGAGATAAGCGACATAGTGGATACTGATAGTGGAGTTCACATAATCATGAGAACAGGTTGA 384 0.5234 LSLSSNRHGGDGGEVRASHILVKHQGSRRKASWKDPEGQVIKNTTRDSDVSQLKALRDDIVSGKAKFEDIASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIVDTDSGVHIIMRTG* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1404 127 MobiDBLite consensus disorder prediction 1 38 - -
Amo05g1404 127 Gene3D - 10 127 IPR046357 GO:0003755
Amo05g1404 127 Pfam PPIC-type PPIASE domain 19 126 IPR000297 GO:0003755
Amo05g1404 127 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 14 127 - -
Amo05g1404 127 SUPERFAMILY FKBP-like 13 126 - -
Amo05g1404 127 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 12 127 IPR000297 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1404 Amo-Chr5 20265752 20267127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1404 45 123 Sulfurtransferasese or Rhodanese AT5G19370 30.380 2.95e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1404 K09578 - gmx:100500451 217.624