Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1397 ATGTGGCCTCTGTATCTTGTAGCATTGATCATTATCTTGCCAACATTTTTGGCTTATAGATGGAAGAGTCCCACATGCAATGGAAGGCTTCCACCAGGTTCAATGGGGTTGCCACTTGTTGGTGAGACCCTTCAGTTCTTCTCTCCTAACACTTCTGATGACATTTCTCCCTTCATCAAGCACAGGATCAAAAGGTATGGATCAATATTCAAGACTAACTTGGTGGGGAGACCAGTGGTGGTATCAACAGACCCRGATCTGAATTACTTCATATTCCAGCAAGAGGGACAAGTGTTCCAGAGTTGGTACCCTGARACATTCACAGAGATCTTTGGGAGACAGAATGTAGGATCATTACATGGATTCATGTACAAGTACCTCAAGAACATGGTGCTGAGTCTCTTTGGTCCTGAAAGCCTTAAGAAGATGCTCTCTGAGGTTGAACATGCAGCATGCACTTCCTTACAACACTGGTCATGCCAGGACACTGTTGAACTCAAAGAAGCAACAGCCACTATGATATTTGATTTAACTGCCAAAAAACTCATCAGTTATGACTCCAAGAATTCATCAGAGAATCTAAGGGAGAACTTTGTTGCATTTATACAAGGACTTATCTCCTTCCCTCTTGACCTCCCAGGAACAGCATATCATAAATGTCTTCAGGGTAGGAAAAGGGCAATGAAGATGCTGAAGAAGATGCTTGAGGAAAGAAGAGCAAAGCCAAGGAAAGAGCAGAGTGATTTCTTTGACTATGTAGTTGAAGAACTCAAGAAAGAGGGAACAATCCTCACAGAAGCCATAGCCTTGGACCTCATGTTTGTCCTCCTCTTTGCAAGCTTRGAAACCACTTCTCTCGCAATCACTTACGCCATCAAAGTCCTRTCTCACAATCCCTTGGTCCTCAAGCAACTACAAGAAGAACATGAATCCATACTCAAAAGGCGCGAAGATCCTAACTCCGGAGTCACATGGAAAGAATACAAATCAATGACATATACATTTCAGTTCATTAATGAAACTGTGAGACTTGCAAATATAGTTCCAGGAATCTTCAGAAAGGCACTAAGGGAAATTAATTTCAAAGGATATACCATACCAGCAGGCTGGGCAGTAATGGTGTGTCCCCCAGCTGTTCACTTAAGTCCAGCCAAATATCAAGATCCTCTCTCCTTCAACCCTTCCAGATGGGAGGGAATAGAATTGAATGGTGCAACCAGACAATTCATGGCTTTCGGCGGCGGCATGAGATTTTGTGTTGGAACAGACTTCACTAAGGTTCAGATGGCTGTCTTTATTCATTGCTTGGTGACCAAGTACAGGTAA 1326 0.4284 MWPLYLVALIIILPTFLAYRWKSPTCNGRLPPGSMGLPLVGETLQFFSPNTSDDISPFIKHRIKRYGSIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPETFTEIFGRQNVGSLHGFMYKYLKNMVLSLFGPESLKKMLSEVEHAACTSLQHWSCQDTVELKEATATMIFDLTAKKLISYDSKNSSENLRENFVAFIQGLISFPLDLPGTAYHKCLQGRKRAMKMLKKMLEERRAKPRKEQSDFFDYVVEELKKEGTILTEAIALDLMFVLLFASLETTSLAITYAIKVLSHNPLVLKQLQEEHESILKRREDPNSGVTWKEYKSMTYTFQFINETVRLANIVPGIFRKALREINFKGYTIPAGWAVMVCPPAVHLSPAKYQDPLSFNPSRWEGIELNGATRQFMAFGGGMRFCVGTDFTKVQMAVFIHCLVTKYR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1397 441 SUPERFAMILY Cytochrome P450 27 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 Pfam Cytochrome P450 31 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PANTHER CYTOCHROME P450 26 10 440 - -
Amo05g1397 441 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 10 440 - -
Amo05g1397 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Amo05g1397 441 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 PRINTS E-class P450 group I signature 419 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1397 441 Gene3D Cytochrome P450 22 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1397 Amo-Chr5 20086020 20088648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1397 1 441 Cytochrome P450 AT1G12740 72.545 0.0 688