Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1384 ATGAACAGTGGTAGCAGGCAAAGCAGCACAAGGTGGACACCAACAACGGATCAGATAAGGATATTGAAGGATTTATACTACAACAATGGAGTAAGGTCTCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCCGTGAGAGGCAGAAGAAGAGGTTCACTTCTGATTCTACTACTACTATCAATGCCAATAATCTTCCACTTCCAACCATGCATAGAGGATCCACCATTAACAACAACAACAATGCTCCTAATTGTTGGAATAAACCTACTGAAGACATTACTACTACTACTACCTTTCATAGCAACAAGTATTATTCCAACAATATGCCATCATCAACTGGTAAAAAAATGGGGAATTATGGCTGTGGATCTGTTCCCATGGAGAAGAGTTTTAGGGAGTGTACAATATCTGCAGGTGGAGGAAGCAGTGTTGGTGGTGCCATAAACCACAACCTGGGATGGGTTGGTGTGGATCCTTATTCATCAACTTACACTGCTTTCTTTGACAAAATAAGGCCTGAGATTGAAACCCTTGAACAAGAACAAGGTGATGATAATAATGATGATGAAGAAATTGATGATGTCACTGAGATTGAAACCCTGCCTTTGTTCCCTATGCATGGTGAAGACATCCATGACTATTGCAGCCTCAGATCCAATAATTCTTCTTCTTCTTCTTTTAACTATGATCATCATCATCATGGATTCAACAACGGTGGTTCTCGTGCTTCCTTGGAGCTTAGTCTCAATTCCTACGGTCGCAAGTCTCCAGATTATGCTTGA 849 0.4134 MNSGSRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSTTTINANNLPLPTMHRGSTINNNNNAPNCWNKPTEDITTTTTFHSNKYYSNNMPSSTGKKMGNYGCGSVPMEKSFRECTISAGGGSSVGGAINHNLGWVGVDPYSSTYTAFFDKIRPEIETLEQEQGDDNNDDEEIDDVTEIETLPLFPMHGEDIHDYCSLRSNNSSSSSFNYDHHHHGFNNGGSRASLELSLNSYGRKSPDYA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1384 282 MobiDBLite consensus disorder prediction 76 92 - -
Amo05g1384 282 PANTHER PROTEIN WUSCHEL 5 276 - -
Amo05g1384 282 Gene3D - 2 70 - -
Amo05g1384 282 MobiDBLite consensus disorder prediction 70 92 - -
Amo05g1384 282 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 276 IPR044555 GO:0003700|GO:0099402
Amo05g1384 282 CDD homeodomain 10 72 IPR001356 GO:0003677
Amo05g1384 282 Pfam Homeodomain 9 70 IPR001356 GO:0003677
Amo05g1384 282 SMART HOX_1 7 75 IPR001356 GO:0003677
Amo05g1384 282 SUPERFAMILY Homeodomain-like 5 75 IPR009057 -
Amo05g1384 282 ProSiteProfiles 'Homeobox' domain profile. 5 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1384 Amo-Chr5 19855869 19857408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1384 6 272 Wox Gene Family AT2G17950 39.726 1.42e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo05g1384 Homeodomain 1.2e-17 CL0123