Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1383 ATGAAGCAGGTTACCGTGTTTGCTGTACATTGTGCTGCATGCTTTTATTATCTTTTCACAGCTCGTTATCGTGATCCCAGAAGGACATGGATTAGAGCAACAATGGAAAATTTTCTTCGGCAAAACTTGTGGACAAGATATGTTACATCTATTTATTGGTCAATTACTACCTTAACAACTGTTGGCTATGGAGATCTGCATCCAGTTTTAGAGATGAAAGCAAAGAATTTTCCTCCTCAAGAAGATGTAATCTTACAGAATGAAGCTCCAACTGATTTCTACATACTAGTCACTGGTGCTGTGATTAATCTCAAAAAGTTAATCTAA 327 0.367 MKQVTVFAVHCAACFYYLFTARYRDPRRTWIRATMENFLRQNLWTRYVTSIYWSITTLTTVGYGDLHPVLEMKAKNFPPQEDVILQNEAPTDFYILVTGAVINLKKLI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1383 108 PANTHER POTASSIUM CHANNEL AKT1 4 69 - -
Amo05g1383 108 PANTHER POTASSIUM CHANNEL AKT1 69 101 - -
Amo05g1383 108 ProSiteProfiles cAMP/cGMP binding motif profile. 72 108 IPR000595 -
Amo05g1383 108 Pfam Ion channel 7 69 IPR013099 -
Amo05g1383 108 SUPERFAMILY Voltage-gated potassium channels 5 69 - -
Amo05g1383 108 PANTHER POTASSIUM CHANNEL AKT1 4 69 IPR045319 GO:0005249|GO:0006813
Amo05g1383 108 Gene3D - 3 75 - -
Amo05g1383 108 PANTHER POTASSIUM CHANNEL AKT1 69 101 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1383 Amo-Chr5 19807986 19810126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1383 69 99 Ion Channels AT2G26650 83.871 9.16e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1383 K21867 - egr:104436639 126.716