Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1345 ATGGATCATTCAACCTCAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGATCAGGTCTTTTTTGGGTGTATTTTTGCTAGAAGTGTGGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCCACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCAACAGCCGGTCTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTATGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGAAACTAAGCATGTCCATTCGTCATGCAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGCTGCTGGGGGTCATCGCGAGTTAAAT 594 0.4411 MDHSTSDCQLNPGEVDYEFESNEVPEIRSFLGVFLLEVWPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVMLDHSHPCCPSKAEMLKQHRKLSMSIRHAIENNEEAGIRPSKTYQSFVAAAGGHRELN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1345 198 Pfam FAR1 DNA-binding domain 64 149 IPR004330 -
Amo05g1345 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 163 - -
Amo05g1345 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 45 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1345 Amo-Chr5 19009535 19010547 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g1345 FAR1 5.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1345 - - adu:110278638 349.747