Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1328 ATGAATATGGTGCCTGAGAGAGCTAGGCTACACTTAGCCTTAACCTTCCTACAATTTTGTCATGCTGGACATCATATAATAGTGAGAATTGCTCTCAACATGGGTTTAAGCAAGCTAATCTTCCCAGTATATAGAAACATTACCGCCCTCGTTCTTCTGGCTCCTCTTGCTTATTTTTCAGAGAAGAAAGACAGGCCACCCCTAACCGGTTATTATATGATGCAATTTTTCTTACTTGGACTAGTTGGAATAACCATAAAAGAAGGATGTTACCTAGTGGGTCTAGATAACACATCGCCCACGTTTGCATCTGCTATGCAAAACTCAGTTCCAGCCTTAACTTTTCTGATGGCTGCAGTACTAAGATATGAGAGTGTGCACTTGAATAGGCTAGATGGTTTTGCTAAGGTTCTTGGAGTAGTTGCTTCTGTTGGAGGAGCATCAATCATCACTCTTTACAAGGGACCTACCATCTATGCTCCATATTCAACATTGAATCATAAACAATCATTGTCTATGTTGGGGGATGCCACAGGAAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGTCACTGCTTATGTTGGTCTGCTTGGATTGTAATGCAAGCATCTGTTCTCAAAAAGTACTCTTCCCCACTCTCGGTTTCTGCCTTTACTTGCTTCTTTGGTATCCTGCAATTTGCAACAATCGCAGCGTTTTTCGAGAGAGATTACAAGGCCTGGCAATTCAATTCTAGTAGTGAAATCTACAGTGTCTTGTATGCGGGACTAGTGAGTTCAGGGATAGCAGCAGCAATACAGATATGGGCTATTGCTAAGGGAGGACCAGTGTTTGCTTCAATTTATCTACCTTTACAGACATTAATGGTAGCCTTGATGGCATCCATTCTTTTAGGGGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTATTGATTATAACAGGCTTATACCTTGTTGTGTGGGGAAAAAGTGAAGAAACAAAATATGGCAAAGAGGTCATAGCCCCTATGGAGTCCAAGAATCATGGTGAAGGAATTTGTGGCAATGCTTCCATCATCCAACCTTTGATTCTTACCCAAAACACTTAG 1095 0.4146 MNMVPERARLHLALTFLQFCHAGHHIIVRIALNMGLSKLIFPVYRNITALVLLAPLAYFSEKKDRPPLTGYYMMQFFLLGLVGITIKEGCYLVGLDNTSPTFASAMQNSVPALTFLMAAVLRYESVHLNRLDGFAKVLGVVASVGGASIITLYKGPTIYAPYSTLNHKQSLSMLGDATGKNWNLGCICLFGHCLCWSAWIVMQASVLKKYSSPLSVSAFTCFFGILQFATIAAFFERDYKAWQFNSSSEIYSVLYAGLVSSGIAAAIQIWAIAKGGPVFASIYLPLQTLMVALMASILLGEEFFLGGIIGALLIITGLYLVVWGKSEETKYGKEVIAPMESKNHGEGICGNASIIQPLILTQNT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1328 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 326 - -
Amo05g1328 364 PANTHER WAT1-RELATED PROTEIN 7 334 - -
Amo05g1328 364 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
Amo05g1328 364 Pfam EamA-like transporter family 21 150 IPR000620 GO:0016020|GO:0016021
Amo05g1328 364 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016021|GO:0022857
Amo05g1328 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1328 Amo-Chr5 18777206 18779257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1328 4 345 Nodulin-like Gene Family AT1G75500 61.318 1.32e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1328 - - gmx:100790386 528.48