LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo05g1307	ATGGAACAAGCAATTTGTGAAGGCGCATTGTACGGTACAACATATGATAATATTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGCTTAGTGAAGATGACACACATCATGTGGACAAGGGGAAAGATTCTGGAAGCGTTATTGAAGTAGTGGACGATGCAATGGCAGTGAATAATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACTTTTATACTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGGATTAGGAACACCAACTTTGACAAGACCAGGAAGGATTCAATGATACCTGTTAACCAATCGTTACACTGTAGTTGTGAAAGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGCGAATAATAACAGCCGGATGCAAAGCAAGGATGTACGTCATGCTTGATAGACAGAAGGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGCACTACACTGAGTACAGGGAACTGACCATGCATGTCAAGTACCTTATGACGAACGTCGAATGTGGGTTCCAATCTATTTTCAAGGTTTAG	600	0.425	MEQAICEGALYGTTYDNIDQYNSCDVNVPSLSEDDTHHVDKGKDSGSVIEVVDDAMAVNNELPDHTGIPLDEIPYFYTNYAKKVGFVTRIRNTNFDKTRKDSMIPVNQSLHCSCESYRESRVKAATRVKRIITAGCKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQAVHYTEYRELTMHVKYLMTNVECGFQSIFKV*	200

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo05g1307	199	Pfam	FAR1 DNA-binding domain	76	164	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo05g1307	Amo-Chr5	18574228	18576975	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo05g1307		FAR1	4.2e-14	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo05g1307	-		-	ahf:112803266	370.933