Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1300 ATGATTGCTACCTTGCCTGTTGCACAACTTTTCTTCTTTCACATCCTCTTTGTTGAAAAGCATATAAATTATGGAAGCAATGGGATAGTGAATGAGAAGCCAAGATTCGCTTGGGCAGCAAATAGGGAAGCAAAGTCAACATGCCTTGATGGCCTTGACAACTATGACTATAGTGCTTATCAATGGACCATTCAGCTTGTCACCAATGATAGCCGCTTGGAAAATATCCTCTTCCCTATCTTATGGGGCCTCATGACTCTCAGGTTTGATCAATGTTCAATCTCCCCACTATCATTAAAAGGAGTCAAGGATGCTGGATATGAGAAAGATTACTATTGTACAGGCGGAAAACTCTTCTTGTAA 363 0.4077 MIATLPVAQLFFFHILFVEKHINYGSNGIVNEKPRFAWAANREAKSTCLDGLDNYDYSAYQWTIQLVTNDSRLENILFPILWGLMTLRFDQCSISPLSLKGVKDAGYEKDYYCTGGKLFL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1300 120 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 88 - -
Amo05g1300 120 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 16 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1300 Amo-Chr5 18520321 18521658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1300 13 87 Ion Channels AT5G54250 54.667 6.26e-23 90.5