Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1274 ATGGCGGAGGAAACCAAGATTTTGGTCCTTGGACCAACCGGAGCCATTGGAAGGCACATAGTTTGGGCCAGTGTTAAAGCAGGTCACCCCACTTTTGCTTTGGTCAGGAAGAACGCTGTCGCTATTCCTAAACCTACCCTCATCACCGCCGCTAACCCCGAAAGTAAGGAACAACTTCTTGAGAGCTACCAGAAATCCGGCGTTACCCTGCTCGAGGGTGACATAAATGATCATGCAAGTTTGGTTAAGGCCATCAAGCAAGTTGATGTTGTGATCTGCGCAGCTGGTAGATTACTCATTGAGGATCAGGTGAAGATTATTGCAGCAATCAAGGAAGCTGGAAATGTAAAGAAGTTCTTCCCATCAGAATTTGGGCTTGATGTGGACCGCCACGACGCATTAGAACCCGTTAGGGAAGTTTTCGAGGAGAAGGCGAAAATCCGAAGATTAGTTGAGGAGGCAGGAATCCCCTACACTTACCTCTGCTGTCACGCTTTCACGGGTTATTTCATGCGTAACTTGTCACAGCTTGATACCACAGTTCCTCCAAGGGATAAAGTATACATTCAAGGAGATGGAAATGTCAAAGGTGCTTATATTACCGAGGCAGATGTTGGTACCTATACAATTAAGGCAGCAGCAGACTCTAGAACTTTGAACAAAGCCTTTCACATAAGGCTCCCTAAAAATTATTTGACTTTCAACGAGGTGGTTTCATTGTGGGAGAAAAAGATTGGCAAGACCCTTGAGAGGATTTACGTTCCTGAGGAAAAAGTTATTGAACAAATCAAGGTGTCATCTTTCCCAAATAACTACCTGTTGGCGTTGTACCATTCACAGCAGATAAGGGGTGATGCAGTGTATGAGATTGACCCTGCTAAAGATGTAGAAGCTTATGAACTTTACCCTGATGTGAAATACACCACTGTTGATGAATATTTGAATCAATTTAAAAGCAAAGTTTTAGTTGTGGGAGGCACTGGATACATCGGAAAATTCATAGTTAATGCAAGCGCAAAAGCCGGACACCCCACGTTTGTTCTTGTCAAAGAGAGCAGCCTCTCTCATCCTCACAAATCCAACCTTATTCAAAGCTTCAAGAGTTCCGGAGTCACCTTTCTATATGGTGATCTAAGTGATCATTCAAGTCTTGTTAAAGCATTGAAGCAAGTTGATGTTGTCATCTCTGCTGTAAGTGGAGCACAAACGGAAGACCAACTCAACATCATATCGGCAATAAAAGAAGCTGGAAACATCAAGAGGTTTTTGCCATCGGAATTTGGGCTGGATGTAGACCGTCATAACGCGGTTGAGCCAGCAGCTAGTGCTCTTGCGGGAAAAGCGAAAATCAGAAGGGCGATTGAAGCTGAAGGAATTCCCCATACTTATGTTGTTTCCAATGCCTTTGCTGGATACTTCTTAAGTACTCTTGGACAGCAAGGTGTCACAGCTCCTCCCAGAGATAAGATTGTTTCGCTGTGGGAGAACAAGATTGGCAAGACCCTTGAAAAAATATATATCCCTGAGGATCAAATTCTTAAGAACATCCAAGAGTCACCTTTTCCTGAGAGCCTTCTCTTGGCATTATCCCACTCTGCGCTGGTTAAGGGAGATTGCACAAACTTTGAGATTGAACCTTCTTTTGGCGTGGAAGCTTCTCAATTATACCCTGAAGTGAAATACACCACTGTCGACACCTACTTGAATCAGTTTAAACACTCTACCAAGAGTGGTTATGAGCCGTCAGACACAGAGACAGAGTGGCAAGAGGTTCCGAGACATGAACGAGAAAGAAAGAACATTGCTTTGGATTCTGAAGATGCAAAAGCTTTCACTCTAATTGCCAAGAGTCCATTGGCACTACACAGGAGGCACCAATACAACCATTCCAAGTTCGAAACTGAAACCTCATCAGCCACCACAACAATAGCTTCTGTTCCAAGCCAACCTCGGAGAAGACAACACCATAGCAAGTTTGAACACAAGGAGAAATATAAGCCCTTTGCCAAAACCAGATGTTGGGAGAACCGTGTCTCCTTACAGCAGAAAGCATCACGGTTCTTCAGATCAGTGACAGCACCAAGGTTGAGGGAACAGCAGAGAAGAACTACGTCTCCAATGGCCAGAGGCATGGTTCTCAATGCACCTTCAGTGGCAGAGATCAATGAAATCATAGCAGAGGTGAAACTATCCAATGACCCTAGCACTTTGGATGAGTCAATGACTTCCACCACTGAGTCTATTCAACCGGGTGATCTTTTCTTCTCTCGAGAAAGCAGTGCCTTGCAGGGCAAGAAATCTTCGCTGTTGCCCCAAAAACTTCAACAATATGGATATTATAGCCCAAGTCCTGCAGGAACCGCCATGAGTCCCCACATTAGAGGTCTCCCTGCTTCTTCCGTTGAGGATGAAAGCAACGGAAATGGCATGAACATCCGAGGAATCGCCTCATCTGGTGTGTCTAGATCAAGTTCAGCTGTTACAAGCAGAAAGGGCGGTAGCAGTATGACGAGCGATGGTAGTGTGAAGACAACTGATAGCATGAGGAAATTCACAGCCAACAGGAAGAAGAGCCAGAAGGATGCATCATGGTTTGCTTGCATGAGGACAGGAAACTGCAGGACATCGATGAAATCGCCGGAGCGTAAAAGGCCAATTGAGGCTTCTTTCATTGGCAGGGCTATTGTGGTGGAAACCCTCCCACAATTCTGGGCTGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGCCCTCATATTCTGCTCAAAGGACCCTCCGGTTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTACGCGAAATATATGGTGATGCATGCTGCAATATGTCCCATGAGTTAAGGAGCTTCCCTATTCAGGACAAGAGGCCTATCAAAGTATGTGTTTCAATAGCATCTAGTGCGCATCACATGGAGCTCAATGTAAGCATGGAACCAAATGCTAAATATGCTTTGCTGGGATTAATCAAAGAAATTAGCAATATATATGCAATGACACCCGAAGTCAGCAATGTTAATTTCAAGCCTGATTATAAAGTAATACTTCTTTATGGCGTTGATAAAGCAGTGGAGAACATCCAGCACATGATTAAATGGATTATAGACCGGTATTCGGATATATGTAAACTAGTTCTCTGCTGTGAAGATGATGCAGCCATTGTTGAGCCTGTTAAAAACCGTTTTAAAATTATCAAAGTTGATGCACCTCAAACTCACCAAATTGCTGAAGTTCTTATTCATATAGCAAAGAAAGAGGAAATTGATGTATCCCTTAATTTTGCCGCAAAGATTGCCATAAAATCAAAGCAAAACCTGAGGAAAGCTATCATGGCACTCGAAGCTTGCAAGGCGCACAACTTACTCTCAATAAGAGGAAAATTTCAAATGCTTCTCTTGGATTTTGTCCACCCCAAACTGATCCTGCAGAAATTGGTGGAAGAGCTGCTGAAAAGAATTGAGGTCAGCTTAAAAAGAGAAGTCTACTATTGGCATGCTTATTATGAAAGAAGACTGCCACCCGGAACAACAGCTTTACTAAAGTTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTGCGGTACTCAACAATATGTGTAG 3681 0.4366 MAEETKILVLGPTGAIGRHIVWASVKAGHPTFALVRKNAVAIPKPTLITAANPESKEQLLESYQKSGVTLLEGDINDHASLVKAIKQVDVVICAAGRLLIEDQVKIIAAIKEAGNVKKFFPSEFGLDVDRHDALEPVREVFEEKAKIRRLVEEAGIPYTYLCCHAFTGYFMRNLSQLDTTVPPRDKVYIQGDGNVKGAYITEADVGTYTIKAAADSRTLNKAFHIRLPKNYLTFNEVVSLWEKKIGKTLERIYVPEEKVIEQIKVSSFPNNYLLALYHSQQIRGDAVYEIDPAKDVEAYELYPDVKYTTVDEYLNQFKSKVLVVGGTGYIGKFIVNASAKAGHPTFVLVKESSLSHPHKSNLIQSFKSSGVTFLYGDLSDHSSLVKALKQVDVVISAVSGAQTEDQLNIISAIKEAGNIKRFLPSEFGLDVDRHNAVEPAASALAGKAKIRRAIEAEGIPHTYVVSNAFAGYFLSTLGQQGVTAPPRDKIVSLWENKIGKTLEKIYIPEDQILKNIQESPFPESLLLALSHSALVKGDCTNFEIEPSFGVEASQLYPEVKYTTVDTYLNQFKHSTKSGYEPSDTETEWQEVPRHERERKNIALDSEDAKAFTLIAKSPLALHRRHQYNHSKFETETSSATTTIASVPSQPRRRQHHSKFEHKEKYKPFAKTRCWENRVSLQQKASRFFRSVTAPRLREQQRRTTSPMARGMVLNAPSVAEINEIIAEVKLSNDPSTLDESMTSTTESIQPGDLFFSRESSALQGKKSSLLPQKLQQYGYYSPSPAGTAMSPHIRGLPASSVEDESNGNGMNIRGIASSGVSRSSSAVTSRKGGSSMTSDGSVKTTDSMRKFTANRKKSQKDASWFACMRTGNCRTSMKSPERKRPIEASFIGRAIVVETLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRELAMALLREIYGDACCNMSHELRSFPIQDKRPIKVCVSIASSAHHMELNVSMEPNAKYALLGLIKEISNIYAMTPEVSNVNFKPDYKVILLYGVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDAAIVEPVKNRFKIIKVDAPQTHQIAEVLIHIAKKEEIDVSLNFAAKIAIKSKQNLRKAIMALEACKAHNLLSIRGKFQMLLLDFVHPKLILQKLVEELLKRIEVSLKREVYYWHAYYERRLPPGTTALLKLEEFVAKFMSIYRKSCGTQQYV* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1274 1226 PANTHER PINORESINOL REDUCTASE-RELATED 1 318 - -
Amo05g1274 1226 Gene3D - 902 1093 IPR027417 -
Amo05g1274 1226 PANTHER ISOFLAVONE REDUCTASE 319 491 - -
Amo05g1274 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 1141 IPR027417 -
Amo05g1274 1226 CDD PCBER_SDR_a 320 567 IPR045312 GO:0016491
Amo05g1274 1226 PANTHER PINORESINOL REDUCTASE-RELATED 490 572 - -
Amo05g1274 1226 PANTHER PINORESINOL REDUCTASE-RELATED 319 491 - -
Amo05g1274 1226 MobiDBLite consensus disorder prediction 813 855 - -
Amo05g1274 1226 Gene3D - 491 580 - -
Amo05g1274 1226 CDD PCBER_SDR_a 6 313 IPR045312 GO:0016491
Amo05g1274 1226 Pfam NmrA-like family 7 307 IPR008030 -
Amo05g1274 1226 Pfam NmrA-like family 321 491 IPR008030 -
Amo05g1274 1226 Gene3D - 317 490 - -
Amo05g1274 1226 Gene3D - 1100 1216 - -
Amo05g1274 1226 SUPERFAMILY post-AAA+ oligomerization domain-like 1137 1216 IPR008921 GO:0003677|GO:0006260
Amo05g1274 1226 MobiDBLite consensus disorder prediction 632 650 - -
Amo05g1274 1226 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 318 522 IPR036291 -
Amo05g1274 1226 PANTHER ISOFLAVONE REDUCTASE 1 318 - -
Amo05g1274 1226 MobiDBLite consensus disorder prediction 813 848 - -
Amo05g1274 1226 PANTHER ISOFLAVONE REDUCTASE 490 572 - -
Amo05g1274 1226 MobiDBLite consensus disorder prediction 631 660 - -
Amo05g1274 1226 CDD AAA 919 959 - -
Amo05g1274 1226 Gene3D - 163 314 - -
Amo05g1274 1226 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 291 IPR036291 -
Amo05g1274 1226 Gene3D - 6 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1274 Amo-Chr5 18132028 18142825 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1274 903 1217 Core DNA Replication Machinery Family AT5G27740 36.390 6.15e-65 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1274 K10756 - gmx:100795321 793.497