Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1131 ATGGCTTTCTTTCTACCCTCTCTCTCAAGTAGTATTTTTCTTGCATTCATGTTGTTCTCCGTCACCAGCATCCCAACTCAATCACAACAGGTTAATGGAACAGACTTTTCATGCCCAGTGGATTCACCTTCATCCTGTGGAACATATGTGACATACATTGCTAAATCTCCAAACTTCTTGAGCCTTTCTAACATATCTGACATATTTGACACCAGCCCTTTATCCATTGCAAGAGCAAGTAACATAAAGAATGAGGGTGACAAGCTGGTTCCAGGCCAAGTCTTACTGATACCTGTCACTTGTGGTTGCACTCAAAACCAATCTTTCGCCAATATRACCTATGAGCTAAGGCAGGGTGATYTGTACGACSTTGTCTCAAAAACAACATATGAGAATCTCACAAATTGGCGTGCTGTCAACYATTCAAACCCAGATTTGAATCCAGTTCTGCTGCCAYTAGGTGTGAAAGTATTGTTCCCTTTATTCTGCAGGTGCCCTTCTAAGAAYCAGTTACAYAAAGGGATAGAATATATGATCACCTATGTGTGGCAGAACAATGACAATGTTTCCTCTGTAGCAGCCAAGTTTGGTGCATCGWCYGTGGACATATTGTCCGAAAACAACTACGGTGGAAACTTCACAGCTGCAACCTATCTTCCGGTTTTYATTCCTGTGACGAAGTTGCCYGTTCTTACTCAACCCGAGWCTTCACATGGAAGAAAGAGAAGCATTCAAATCCCTGTTATAATRAGTATTAGCCTGGGGTTCACCCTTGTTGTTGCTGTTATAGTAATATCAATGCTACTCTCTGGAGTRTCAGGCTACGTGAGTAAGCCAACCGTGTATGAAGCCAATGAGGTTATCAAAGCCACCATGAATCTCAGCGAACAGTGCAAGCTTGGGGGCACAGTTTACAAGGCCAAAATAGAAGGGCAGGTCTTGGCAGTGAAAAAAGTGAATCAAGTAGTTTCTGAGGAGCTGAATATTCTGCAGAAGGTGAATCATGGAAACCTGGTGAAACTGATGGGTGTATCTTCAGACAGTGATGGAAACCATTTCCTGGTTTATGAGTATGCTGATAACGGGTCCCTTGATGYGTGGCTCTTCTCCAAGTTGTCTTTGAAGGCCTCGCTTACATGGTATCAGAGGATTAACATAGCATTGGATGTTGCCATGGGTCTGCAATACTTGCATGAGCACACTTATCCAAGAATAGTCCATAGGGACATCACAACAAGTAACATCCTTCTTGACTCCAACTTCAAGGCCAAGATAGGGAACTTCTCCATGGTCAGAACTACTACGAATCCCATGATTTCCAAGATCGATGTCTTTGCTTTCGGGGTTGTTCTCATTGAGTTGCTGACAGGCAAGAAAGCCATGACAACAAAGGCAGATGGCGAGGTAGTAATGCTGTGGAAGGATATTAGGAAGATGTTTGAAGTGGAAGACGAAAAGGAAAAGGAGGAGTGTCTGAGAAGATGGATGGATCCTAAGCTAGAGTGCCTTTACCCTGTGGATTATGCTCTCAGCTTGGRCACGTTGGCCGCGAATTGCACGGCCGATGTATCATTGTCTAGACCAACCATGGCAGAAGTTGTTCTTGGCCTCTCCCTTCTCACTCAACCATCTCAAGCTGCACTAGAGAGATCATTGACTTCTTCTGCGTTGGAAGCAGAGGTTACTCATGTGGCTACTCCCATAGCAGCACGTTAA 1716 0.4376 MAFFLPSLSSSIFLAFMLFSVTSIPTQSQQVNGTDFSCPVDSPSSCGTYVTYIAKSPNFLSLSNISDIFDTSPLSIARASNIKNEGDKLVPGQVLLIPVTCGCTQNQSFANXTYELRQGDLYDXVSKTTYENLTNWRAVNXSNPDLNPVLLPLGVKVLFPLFCRCPSKNQLHKGIEYMITYVWQNNDNVSSVAAKFGASXVDILSENNYGGNFTAATYLPVFIPVTKLPVLTQPEXSHGRKRSIQIPVIXSISLGFTLVVAVIVISMLLSGVSGYVSKPTVYEANEVIKATMNLSEQCKLGGTVYKAKIEGQVLAVKKVNQVVSEELNILQKVNHGNLVKLMGVSSDSDGNHFLVYEYADNGSLDXWLFSKLSLKASLTWYQRINIALDVAMGLQYLHEHTYPRIVHRDITTSNILLDSNFKAKIGNFSMVRTTTNPMISKIDVFAFGVVLIELLTGKKAMTTKADGEVVMLWKDIRKMFEVEDEKEKEECLRRWMDPKLECLYPVDYALSLXTLAANCTADVSLSRPTMAEVVLGLSLLTQPSQAALERSLTSSALEAEVTHVATPIAAR* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1131 571 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 16 571 - -
Amo05g1131 571 Pfam LysM domain 61 98 IPR018392 -
Amo05g1131 571 Pfam Protein tyrosine and serine/threonine kinase 320 435 IPR001245 GO:0004672|GO:0006468
Amo05g1131 571 Gene3D LysM domain 61 112 IPR036779 -
Amo05g1131 571 ProSiteProfiles LysM domain profile. 50 97 IPR018392 -
Amo05g1131 571 SUPERFAMILY Protein kinase-like (PK-like) 281 541 IPR011009 -
Amo05g1131 571 Gene3D Phosphorylase Kinase; domain 1 271 358 - -
Amo05g1131 571 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 571 - -
Amo05g1131 571 Gene3D Transferase(Phosphotransferase) domain 1 437 558 - -
Amo05g1131 571 ProSitePatterns Tyrosine protein kinases specific active-site signature. 405 417 IPR008266 GO:0004672|GO:0006468
Amo05g1131 571 ProSiteProfiles Protein kinase domain profile. 262 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1131 571 Gene3D Transferase(Phosphotransferase) domain 1 359 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1131 Amo-Chr5 15488081 15489868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1131 80 540 Receptor kinase-like Gene Family AT3G21630 31.227 6.69e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo05g1131 PK_Tyr_Ser-Thr 5.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1131 - - gmx:100301877 762.681