Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1116 GATTGTATAAATAGGACAGAATCAAAGCAAAAATCATTACAAGCACACACCGTCGCTCGTTTAATTAATAATAACATGGAACCTCAACCCTACTTTTTGGTTATTGCAATTTTGGTCTTCACAATCTTGTATTTTCTTGCAAAATATTCCAAACCAAGATCCTATAAACTCCCACCTGGTCCATGGAAATTACCCATCATTGGTAACATCCATCAACTTGCTCTAGCAGGACCATTACCACACCGTGCTTTCAGAGAACTTGCAAAGAAATATGGACCCATCATGCACCTCAAACTCGGTGAGAACTCCACAGTGGTTGTATCTTCCGCTAAGCTAGCCAAGGAAGTTCTCAAAACCCATGATGCCTGTTTTCAAAAGAGGCCTTTCATTGCCGCTGTTCCAACCCTTGTATATGGCCCTGCAGATATTGCATTCTCTCCGTCCGGCGATTACTGGAGAGATATGCGCAAGATATGTACCCTAGAGCTTTTGAGTGTGAAAAAGGTTCAGTCTCTGGCTTCTGTAAGAGAAGCCGAGGCTGAAAAGCTCATTCAGACGATCCGTGAATCTGCGGGTTCACGGATCAATCTGAGTGACATGATTTTCTCCTTGATAAGCGCTTCTGTTTACAGGGCGACTTTTGGTAGCTACAACAAGGAGCATGATGAGTTTGTGATTCTGATTAAAGAAGCAATGGAAATCCTTGGAGGGTTTCATTGGGCGGATTTGTTTCCGTCGATGAAACCTCTGTATTATTTGAGTGGGTTGAAGTCCAAGGTGGAGAAGCTGCACAAGAAACTTGATAGGATCTTGGAGGACATCGTAATGGAACATCAAAAGAAACAAAGAGAAGGTAGGATCGATGCGGAGGAGGAAGACCTTGTTGATGTTCTATTGAGAGTCCAACAAAGTAGCAGTCTCCAGACCAAGCTAATAATTGCAAACGTCAAAGCCGTCATTGAGGACATGTTTGCTGCTGGAACAGATACTACAGCATCAACAATAGAATGGGCCATGGCAGAAATGATAAAGAACCCAAGAGTGATGGCAAAGGCACAAGCTGAATTAAGAGAAGCACTTAGAGGAAAGAAAACAATTCATGAAACTGATATTGAAGATCTATGTTACTTAAAGTTAGTGGTCAAAGAGACACTAAGATTACACTCACCAACTCCATTGTTGATCCCTAGAGAATGCACCGAAGCAACCAACATTCATGGCTATGTTATACCAATCAAAACAAGAGTGATGGTTAATGTGTGGGCCATTGCAAGAGATCCCCAATACTGGCATGACTCTGAGAGTTTTATACCTGAGAGATTTGAAGAAAGTTCTTTGGACTTCAAAGGGAATAATTTTGAGTATTTACCATTTGGGGCAGGAAGAAGAATATGCCCTGGCATGACTTTTGGTGTTGCCAGCGTTACACTTCCTTTGGCTCTCTTACTTTACCATTTCAATTGGGAACTCCCCAATAGGATGAAGCCTGAGGATGTGGACATGACTGAACTCGCTGGCTTGGCAATTGGAAGAAAACATGCCTTGTGTTTGATTCCCACTGTTTATGATCCATAA 1575 0.4216 DCINRTESKQKSLQAHTVARLINNNMEPQPYFLVIAILVFTILYFLAKYSKPRSYKLPPGPWKLPIIGNIHQLALAGPLPHRAFRELAKKYGPIMHLKLGENSTVVVSSAKLAKEVLKTHDACFQKRPFIAAVPTLVYGPADIAFSPSGDYWRDMRKICTLELLSVKKVQSLASVREAEAEKLIQTIRESAGSRINLSDMIFSLISASVYRATFGSYNKEHDEFVILIKEAMEILGGFHWADLFPSMKPLYYLSGLKSKVEKLHKKLDRILEDIVMEHQKKQREGRIDAEEEDLVDVLLRVQQSSSLQTKLIIANVKAVIEDMFAAGTDTTASTIEWAMAEMIKNPRVMAKAQAELREALRGKKTIHETDIEDLCYLKLVVKETLRLHSPTPLLIPRECTEATNIHGYVIPIKTRVMVNVWAIARDPQYWHDSESFIPERFEESSLDFKGNNFEYLPFGAGRRICPGMTFGVASVTLPLALLLYHFNWELPNRMKPEDVDMTELAGLAIGRKHALCLIPTVYDP* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1116 524 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 Pfam Cytochrome P450 58 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PANTHER CYTOCHROME P450 71D8 29 523 - -
Amo05g1116 524 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 Coils Coil 253 273 - -
Amo05g1116 524 SUPERFAMILY Cytochrome P450 58 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Amo05g1116 524 Gene3D Cytochrome P450 50 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1116 524 PANTHER OS08G0105600 PROTEIN 29 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1116 Amo-Chr5 15187258 15189945 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1116 32 524 Cytochrome P450 AT3G26300 44.554 2.11e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1116 - K15472 gmx:100783298 643.269