Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1090 ATGACAAGTGTTAAAGTGATTTCAACAAGCACAATCCATGTAGCAAACAAGGATTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAATTCCTCCTATTTGATCCCATTCAAAAAGGTCTTCTCTTCCGTAACAACCCCATCACTACTCCACCAATCATAATCCAACACCTCAAACATTCCCTTTCCTCCACCCTTTCTTTCTTCCCACTCCTCGCGGGCCGCCTTTCCGTTACGGAACACGATGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCGCTGTTTGTCCATGCCGTTGCGGATAAATACTCCGTTAATGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACAGGGTTAGAAACCACGAAGGAATAACCAAGCCGTTGTTGGCGGTTCAAGTCACCGAGCTCAACGACGGTTTCTTCGTTGGGTGCGCCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCCGAGATCTCACGTGGTTCGGAAGAATTGTCCAAGCCTCCCCTGCTTGAACGCTGGTTCCTTGACAGCTCCGCCTCTGCCATACGCGTTCCTTTGACGAAGGAGAAGATGATACAAAGTGGTTACGACGGTTTCGTCCCAGAACCTCAATGCGAGAGGGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGGCAAAAGCCAACGCAGAAATTGAAGGCGAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTGGGAGCCAGGGTCTTGAGCCCGAAGAAGAAGTGAATTACAGCTTGACGATGGGGGGCAGGGGGAGAATGAAGAGTCCGGCAGTGGCGGAAAACTATTTTGGGAATGCGGTGCAGGTTGGAATAGTGCGCATGAAGGTTAAAGAGCTTCTAGAAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAACAAGATAGTTGGTTTGCACACGGAGGAGAAGATGAAGAGCTACTATAGGGGTTGGGCGGAGAACCCTAGGCTTCTGACGATGCGAAGTTTGGGGGGAAACAATACTTTAGTGACAAGCAGTTCGCCGAGGTTTGATGTTTATGGGAATGATTTTGGGTGGGGGAAACCGGTGGCAGTGAGGAGCGGAGCCGGGAACAAGATCCCTGGCACCATAACGGTTTATGCTGGGGCGGAAGATGGTGTTGACTTTGAAGTTTGTCTTTCATATGAGATATTGGAGGCTATGGGTAATTACCCTGACTTCATGGACGCCTTCTCCGATCCGCCACCTAATAATAACAAACTTTTTCTACCAAATTAG 1371 0.4865 MTSVKVISTSTIHVANKDSTVEEEIQLTPWDLQFLLFDPIQKGLLFRNNPITTPPIIIQHLKHSLSSTLSFFPLLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADKYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGITKPLLAVQVTELNDGFFVGCAMNHVVGDGTSFWHFMNSWAEISRGSEELSKPPLLERWFLDSSASAIRVPLTKEKMIQSGYDGFVPEPQCERVFHFSKDKIAELKAKANAEIEGESKNKISSLQALLTHLWRSVVGSQGLEPEEEVNYSLTMGGRGRMKSPAVAENYFGNAVQVGIVRMKVKELLEGGLGKGALEMNKIVGLHTEEKMKSYYRGWAENPRLLTMRSLGGNNTLVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKIPGTITVYAGAEDGVDFEVCLSYEILEAMGNYPDFMDAFSDPPPNNNKLFLPN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1090 456 Pfam Transferase family 3 432 - -
Amo05g1090 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 441 - -
Amo05g1090 456 Gene3D - 219 434 IPR023213 -
Amo05g1090 456 Gene3D - 1 218 IPR023213 -
Amo05g1090 456 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1090 Amo-Chr5 14480469 14482227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1090 59 400 Monolignol Biosynthesis Gene Families AT5G48930 28.926 4.89e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1090 - - pvy:116114536 476.478