Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1088 ATGGCAAGTGTGAAAGTCATTTCAACAAGTACAATCCATGCAGCAAACAAAGCTTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAACTCCTCCTAGTTGATCCCATTCAAAAGGGCCTCCTCTACCGTAACGACCCGGTCACTCCACCGATCATAATCCAACACCTCAAACATTCCCTTTCATCCACCCTTTCTTTCTTCCCACCGCTTGCGGGCCGCCTTTCCGTTACGGAACATGACGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCATTGTTTGTCCATGCAGTTGCGGATGACTACTCCGTTAACGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACAGGGTTAGAAACCACGAAGGAACAACCAAGCCGTTGTTGGCGGTTCAAGTCACGGAGCTCAACGACGGTTACTTCATCGGGTGCACCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCTGAGATCTCACGTGGTTCGGAAAAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCCTTGACAGCGGCCATGGCTGCTCCGCGTCTGCCATACGGGTTCCTTTGACGAAGGAGAAGATGATCCAAAGTGGTTACTACGGTTTCGTCTCAGAACTGCAACGCGAGAGAGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGACAAAAGCCAAGGCAGAAATTGAAGGCGAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTCGGAACCAGGGTCTTGAGCCCGAAGAAGAGGTGAATTACAGGTTGCTGATAGGTGGTAGGGGGAGAATGAAGAGTCCGGCATTGGCGGAAAACTATTTTGGGAATGCGGTGCAGGACGGAACAGTGAGCATGAAGGTTAAAGAGCTTCTAGAAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAGAAAGATAGTTGATTTGCACACGGAGGAGAAGATGAAGAGTTATTATAGGGGTTGGGTGAAGAACCCTAGGCTTCTGACGGAGGGAGGCATGGCTGGCAATGCTTTAGTGACAAGCAGTTCGCCAAGGTTTGATGTTTATGGGAATGATTTCGGGTGGGGGAAACCGGTGGCGGTGAGAAGCGGAGCCGGGAACAAGAGCCATGGTAAGATAACGGTTTTTGCTGGGGCGGAAGATGGTGTTGACATTGAGGTTTGTCTTTCCTATGAGATATTGGAAGCTATGGGTAATGACTGTGAATTCATGGATGCCGCCTCGCTCCGCCGCCTAATAACAAATTGA 1359 0.4937 MASVKVISTSTIHAANKASTVEEEIQLTPWDLQLLLVDPIQKGLLYRNDPVTPPIIIQHLKHSLSSTLSFFPPLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADDYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGTTKPLLAVQVTELNDGYFIGCTMNHVVGDGTSFWHFMNSWAEISRGSEKLSKPPVLERWFLDSGHGCSASAIRVPLTKEKMIQSGYYGFVSELQRERVFHFSKDKIAELKTKAKAEIEGESKNKISSLQALLTHLWRSVVRNQGLEPEEEVNYRLLIGGRGRMKSPALAENYFGNAVQDGTVSMKVKELLEGGLGKGALEMRKIVDLHTEEKMKSYYRGWVKNPRLLTEGGMAGNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKSHGKITVFAGAEDGVDIEVCLSYEILEAMGNDCEFMDAASLRRLITN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1088 452 Pfam Transferase family 3 441 - -
Amo05g1088 452 Gene3D - 3 220 IPR023213 -
Amo05g1088 452 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 443 - -
Amo05g1088 452 Gene3D - 229 436 IPR023213 -
Amo05g1088 452 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1088 Amo-Chr5 14405473 14407040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1088 58 401 Monolignol Biosynthesis Gene Families AT5G48930 29.444 2.39e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1088 - - pvy:116114536 498.434