Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1086 ATGGCGTCGAAGTCTCCGCCTCTCCCCCCTCCTCCGCCTTTCGCCTCTTCTTCTAGATCAGAGCTTCCCGTCGATCCATCCGGAAACAAAGCGGAGGAAGTGACTCCGACAGTTAAAGATGTGTCAATGGTTATTGATTCTTTAAAGAAACAAGTTGCTGCAGAACGAATTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGGCACAAGCTGGTTGGTGTCACAAACCACCTCTGCAGATTGTCAATGGAGAGGATGGCATGTAATGAAACTGATACACATAGAAGTCTGGACCTTTTAACAAAGCGGCAAAAGGATGCAATTGATATGCACAATGGTGTTCTTGCAAGTGATGATGGGGAGAGCAATAGTTATCCTGAAGATGGTCATGGTTCTACAGCAGTTCTTCTGGGATCTAATGTTGCTGTGAAGAATGCTGTTCGTCCTATCAAGTTACCAGAAGTCAAAAGATTACCTCCTTACACCACATGGATATTTCTGGACAGAAATCAAAGAATGACAGAAGATCAGTCAGTTGTAGGTCGTAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAAGAGGAAATAATAGATGATGAAGAGGAAAAAAGAGAGTTTGTAGATTCAGAAGATTATATACTTCGCATGACCGTTAGAGAATTGGGTTTATCTGATACTGTTCTGGACTCCTTGGCTCAATGCTTTTCTAGAAATACTAGTGAAATTAAGGCCAGATATGAAACTCTTAGTAACAAAGACAATGCTGCTAGGGGTTCCAAGAATGGAGATACCGAAGATATTTCTCAAAGTGAAAAGTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGACTCCTTTGACAATCTTTTTTGCCGACGCTGTCTTGTTTTCGATTGCCGATTACATGGATGTTCCCAGGATCTTGTCTTCCCCGCTGAGAAGCAACCTCTGTGGAACCCTCCTGATACTGAAAATGCACCATGTGGGCCGAATTGTTTTAAATCGGTACTTAAATCAGGAAGGTTTTCCAAAGCTACCTCTTCTGCCCAGGCTGATGTTGAAGAGAAATGTTCAGGTGGTTCTTCATCTAGGAAGAAGTCTTCTGCTAAAAGGCGCATAAAATGCAGCCAAAGTGAAAGTGCCTCATCTAATGCAAAGAACATATCTGAGAGTAGCGACTCAGAGAATGGGCCTGGAAAGGATGCTGTTTCAGCCTCCCAGTCAGCACCACCTAAAGCTAAACCTGTAGGGAGAGGTGGACTTGGTAAGAGGAACAGCAAGCGGGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTGGTTTCTGATTCTGATTCCATTGTTGAAGCTCATGATCATTCATCAAATGACATGATCACTGATCCACCTGTCATCAGCAGTGAAGATAATGCAAGGAAAGAAGAGTTTGTGGATGAGAACATTTGTAAACAGGAATCCACTGACAATAAATCTTGGAAAGCTCTTGAAAAAGGACTCCTAGAGAAAGGAATGGAGATATTTGGGAGAAACAGCTGCTTAATAGCCAGGAATCTTCTAAATGGTCTAAAGACATGTTGGGAGGTTTTCCAATACATAAATTGGGATGAAGGAAAGATGTCAGGTTCTGCTGGGGATGGTGCAAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGAAGATCAAGATTTTTACGCAGAAGAGGTAGAGTTCGTCGCTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATAAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGCAGACAGTACAATCCGTGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCATGTCTTCAAAATGGAACCTGCTGTGAGAAATACTGTGGATGCCCGAAGAGTTGCAAGAATCGATTTCGTGGCTGTCACTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCTTGCTTTGCTGCAGATAGGGAATGTGATCCCGATGTTTGTAGGAATTGTTGGGTCAGCTGTGGTGATGGTTCTCTTGGGATACCTAGCCAAAGAGGTGATAATTATGAATGTAGGAACATGAAGCTTCTCCTCAAACAGCAACAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGTTTGTTCTTGATGCTTACCGCAAAGGTGACAAGTTGAAGTTTGCAAACCATGCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGACCACAGAGTAGGTATATTTGCCAAGGAACGGATAATGGCTGGGGAGGAACTGTTTTACGATTATCGATACGAGCCTGATAGAGCTCCTGCCTGGGCTAGGAAACCAGAGGCATCTGGATCTAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCGTAA 2472 0.4316 MASKSPPLPPPPPFASSSRSELPVDPSGNKAEEVTPTVKDVSMVIDSLKKQVAAERIVSVKKRMEENRHKLVGVTNHLCRLSMERMACNETDTHRSLDLLTKRQKDAIDMHNGVLASDDGESNSYPEDGHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDDEEEKREFVDSEDYILRMTVRELGLSDTVLDSLAQCFSRNTSEIKARYETLSNKDNAARGSKNGDTEDISQSEKSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWNPPDTENAPCGPNCFKSVLKSGRFSKATSSAQADVEEKCSGGSSSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGPGKDAVSASQSAPPKAKPVGRGGLGKRNSKRVAERVLVCMQKRQKKTVVSDSDSIVEAHDHSSNDMITDPPVISSEDNARKEEFVDENICKQESTDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWEVFQYINWDEGKMSGSAGDGANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKFVLDAYRKGDKLKFANHAPDPNCYAKVIMVAGDHRVGIFAKERIMAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1086 823 Gene3D SET domain 735 795 IPR046341 -
Amo05g1086 823 MobiDBLite consensus disorder prediction 1 35 - -
Amo05g1086 823 Pfam CXC domain 655 686 IPR041355 -
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 734 821 IPR045318 GO:0006338|GO:0018024
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 471 734 IPR045318 GO:0006338|GO:0018024
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 23 462 IPR045318 GO:0006338|GO:0018024
Amo05g1086 823 MobiDBLite consensus disorder prediction 356 433 - -
Amo05g1086 823 SMART CXC_2 651 688 IPR033467 -
Amo05g1086 823 MobiDBLite consensus disorder prediction 455 469 - -
Amo05g1086 823 ProSiteProfiles CXC domain profile. 603 702 IPR026489 -
Amo05g1086 823 MobiDBLite consensus disorder prediction 382 411 - -
Amo05g1086 823 MobiDBLite consensus disorder prediction 798 816 - -
Amo05g1086 823 MobiDBLite consensus disorder prediction 798 823 - -
Amo05g1086 823 Gene3D SET domain 617 734 IPR046341 -
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 471 734 - -
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 23 462 - -
Amo05g1086 823 MobiDBLite consensus disorder prediction 455 478 - -
Amo05g1086 823 SMART set_7 492 795 IPR001214 GO:0005515
Amo05g1086 823 ProSiteProfiles SET domain profile. 604 789 IPR001214 GO:0005515
Amo05g1086 823 Pfam SET domain 735 788 IPR001214 GO:0005515
Amo05g1086 823 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 823 IPR025778 GO:0031519
Amo05g1086 823 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 734 821 - -
Amo05g1086 823 MobiDBLite consensus disorder prediction 1 17 - -
Amo05g1086 823 SUPERFAMILY SET domain 591 794 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1086 Amo-Chr5 14388014 14393886 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo05g1086 SET 6.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1086 - K11430 gmx:100799832 1402.88