Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1067 ATGCCGGATCATTATTCAAGTGGTGGTGCCACAATGAACGACCAGCTCTCCAACCCAACCTCCATCTTCGGCCTACGCCTCTGGGTTGTTCTTGGCGTCTGCGTTGGCGCCTCCATTGTCCTCCTCTTATTCCTCATCTCCATTTGCCTCGCTTCCAAGCGCTCCAAGAAAACCACCACCATCACCACCACCACCACCACTACCACCACTTCATCTTCAATCCCTGTCCCTGATGTATCCAAGGAGATCCAAGAGATCAGAGTACTTGACCCCAATCCATTACCTGACCCTATTCCCGAACCGGAACCGGACGAAGAGAACCCCTCCGTGGTCTACAACAGAATCCAATTTGAGATTGGGAAAAACCATAGAATCTCTTACCCTACTGAACAACGACCTTTTCTAAGGTCTTCTTCCCGTGAAGGCAGTGGTGAGGTTCCTACCGTGATCCCTGAGGTTTCTCACTTGGGTTGGGGCCACTGGTACACCCTCAGGGAGCTTGAGGATTCCACCAATGGGTTTGCGCCGGAGAATGTCATTGGCGAAGGTGGCTATGGAATTGTTTACCATGGTGTCTTGAAGGACAACACAAACGTTGCCGTTAAGAATTTGCTCAACAACAGGGGACAAGCAGAGAGAGAGTTTAAGGTTGAAGTGGAAGCTATAGGAAGAGTTCGGCACAAGAATCTAGTGAGGTTGCTCGGTTATTGTGCTGAAGGAGCACACAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTGGAGCAGTGGCTGCACGGTGATGTTGGGTCTTGCAGCCCTCTAACTTGGGAAATTCGAATGAACATTATCCTTGGAACTGCAAAAGGATTAACTTATCTTCATGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAATATCTTGATCGATAAGCAGTGGAATTCCAAGGTTTCAGATTTTGGCCTTGCCAAGCTCCTTGGCTCTCAGAGCAGCTATGTCACCACCCGTGTCATGGGTACATTTGGATATGTAGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGCGATGTGTATAGTTTTGGAATTCTTATCATGGAAGTAATCACAGGGAGGAACCCGGTTGATTATAGCCGTCCGCCGGAAGAGGTGAATTTAGTTGATTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGGGAGTATTGGATCCTAAGCTTCCTGAGAAACCAACATTAAGGGCACTAAAAAGAGTCCTTCTTGTAGCTCTACGCTGCACAGACCCTAATGCACAAAAACGTCCTAAAATGGGGCATGTTATACACATGCTTGAGACTGAAGATTCCCTTAATTACAAAGAGGACCGCAGAGCTAGAAGGGATACAGATCATTCACCTAACCATAGAGCAGAGGATGGATTAAAAGTGAATGCAAATGTATCAGATGGTGACTGTAACAATGAAAATGGCACGTGTGGCCATGAGACAACAAAAAGCCACCAACTAGAAGAGCAATAA 1521 0.4655 MPDHYSSGGATMNDQLSNPTSIFGLRLWVVLGVCVGASIVLLLFLISICLASKRSKKTTTITTTTTTTTTSSSIPVPDVSKEIQEIRVLDPNPLPDPIPEPEPDEENPSVVYNRIQFEIGKNHRISYPTEQRPFLRSSSREGSGEVPTVIPEVSHLGWGHWYTLRELEDSTNGFAPENVIGEGGYGIVYHGVLKDNTNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGSCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSQSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTLRALKRVLLVALRCTDPNAQKRPKMGHVIHMLETEDSLNYKEDRRARRDTDHSPNHRAEDGLKVNANVSDGDCNNENGTCGHETTKSHQLEEQ* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1067 506 Coils Coil 194 214 - -
Amo05g1067 506 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
Amo05g1067 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Amo05g1067 506 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Amo05g1067 506 CDD STKc_IRAK 180 446 - -
Amo05g1067 506 PANTHER OS01G0323000 PROTEIN 9 487 - -
Amo05g1067 506 Gene3D Transferase(Phosphotransferase) domain 1 250 463 - -
Amo05g1067 506 ProSiteProfiles Protein kinase domain profile. 174 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1067 506 PANTHER RECEPTOR-LIKE KINASE PLANT 9 487 - -
Amo05g1067 506 SUPERFAMILY Protein kinase-like (PK-like) 158 447 IPR011009 -
Amo05g1067 506 MobiDBLite consensus disorder prediction 453 472 - -
Amo05g1067 506 Pfam Protein kinase domain 177 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1067 506 MobiDBLite consensus disorder prediction 453 483 - -
Amo05g1067 506 SMART serkin_6 174 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1067 Amo-Chr5 13988481 13991640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1067 138 451 Trihelix Transcription Factor Family AT1G70460 45.625 3.24e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo05g1067 Pkinase 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1067 - - gmx:100797726 776.548