Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1064 ATGGACTGGATTCGAGGACCAACCCTCGGCAGTGGAAGCTTCGCCACCGTCAGTTTAGCCACACCCAAGAACCCTTCCCTTCCGTTCCACATTCCGGTTGCCGTTAAGTCCTCCGATCGTTTCACCTCCTTCCTCCTTGTTAACGAGGAACACGTCCTTAACCGCCTCGGTTCTTCTTGTCCTCGAATCGTTAAGTGCTTGGGTCACGACACTACGGTCGAAAACGGTGAGTCGTTTTACAACATCTTCCTCGAATATGCTTCCAACGGTACGCTCGCTGATCAGATGAAGAAGAATCAAGGTGGGAGGTTCGATGAGAAACAAGTAAGAAGGTACGCGAGGTCCGTCATGGAAGGGTTGAAGCACATTCACGAGAATGGGTTCATTCACTGCGATATTAAGCTTCAGAACATGCTTGTGTTCGAAGATGGCGAGGTGAAGATCTCGGATTTCGGGCTCGCGAAGGAGAAAGGTGCGACAGTGCAGCGTGGAGACAAGAAGTGGGAGTGCAGGGGAACGCCTCTCTACATGTCCCCTGAGTCGGTGAATGATAACGAGTACGAGTCTCCGGCGGATATATGGGCCGTTGGATGCGCCGCCGTGGAGATGCTCACCGGAAAGCCAGCGTGGAATGTTAAGAGTGGGTCCAACATGTGGTCGCTGCTAATTCGGATTGGAGTCGGTGAAGAAATTCCGGTGATTCCGGAGGACTTGTCCGAACAGGGGAAGGACTTTTTGAGAAAGTGTTTCGTTAAGGATCCCAGGGAGAGGTGGACGGCGGAGATGCTCGTCAACCACCCGTTTCTCGCCGATGAAGACAACCATGATGCTTTGATCCATAACGAAATCTCGCCCAAAAGTAACTTTGACTTTCCTGATTGGGATTTCACTTCCACGGTGACTGATTCTGCTGTCACCACTGTTTTGTCGCCGGGGGATTGGCTACCGCGGCTAGTGACGGAGCAGGGATTGCCAGATTGGTCAGAATTCGAGGGCTGGATAAGTGTTCGGAGAAGAGTTATCCTGGAAGCTTCGTTGGTAGTGGGATCTTAA 1053 0.5185 MDWIRGPTLGSGSFATVSLATPKNPSLPFHIPVAVKSSDRFTSFLLVNEEHVLNRLGSSCPRIVKCLGHDTTVENGESFYNIFLEYASNGTLADQMKKNQGGRFDEKQVRRYARSVMEGLKHIHENGFIHCDIKLQNMLVFEDGEVKISDFGLAKEKGATVQRGDKKWECRGTPLYMSPESVNDNEYESPADIWAVGCAAVEMLTGKPAWNVKSGSNMWSLLIRIGVGEEIPVIPEDLSEQGKDFLRKCFVKDPRERWTAEMLVNHPFLADEDNHDALIHNEISPKSNFDFPDWDFTSTVTDSAVTTVLSPGDWLPRLVTEQGLPDWSEFEGWISVRRRVILEASLVVGS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1064 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 306 - -
Amo05g1064 350 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Amo05g1064 350 SUPERFAMILY Protein kinase-like (PK-like) 3 314 IPR011009 -
Amo05g1064 350 Gene3D Transferase(Phosphotransferase) domain 1 3 304 - -
Amo05g1064 350 CDD STKc_MAPKKK 2 269 - -
Amo05g1064 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 306 - -
Amo05g1064 350 Pfam Protein kinase domain 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1064 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Amo05g1064 350 SMART serkin_6 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g1064 350 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1064 Amo-Chr5 13926372 13935565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1064 1 337 MAP Kinase Kinase Kinase AT5G67080 53.143 2.21e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo05g1064 Pkinase 3.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1064 - - aip:107641670 703.36