Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1043 ATGGCCATGGAGAACGTTGAGGGAGGATCTCCTTGTACAGGGACGGGGTTTCAGTCTGGACAGTGCCGCCATTTCTATCTTGCGGTTGACAGGCTTCAGTTCAAGATGCAAACGGTGGTGGATCTGCTGGGCCTTGTGGGGCGACGACCCTCCCTTCCGATGGTTGTGTGCTGCAGCACCCGCGACGACCTTGACTGTCTCTGCTCCGCCGTGTCCGGCCTCCCCTTCATCTCCTCTTCCCCCCTCTACAGCGACCTTTCTGAACACCAACGCGCTTCTACTCTCGACAAGTTTCGCCACTTGAACCACCCCACTGACCATGACGACGACAAGGAGCGCACCTCCCATATGATCATCGTCACCGACGCCTGCCTTCCTCTGCTTTCTTCCGGGGAGTGTCCCCTGAACGCTCATCTTCTCATCAACTACGACCTACCCCCGAAGAAGGAAACTTATGGCAGGCGTTTAGCCACTTGTTTATCACCTGATGGTGTTGTGATCAATATGGTTGTTGGTGGGGAAGTGGTTACTCTCAAAGCTATTGAAGAGAGCAGCAATATTATCATGCAAGAGATGCCAATGCAGATTCTTGACATCTTATGA 603 0.534 MAMENVEGGSPCTGTGFQSGQCRHFYLAVDRLQFKMQTVVDLLGLVGRRPSLPMVVCCSTRDDLDCLCSAVSGLPFISSSPLYSDLSEHQRASTLDKFRHLNHPTDHDDDKERTSHMIIVTDACLPLLSSGECPLNAHLLINYDLPPKKETYGRRLATCLSPDGVVINMVVGGEVVTLKAIEESSNIIMQEMPMQILDIL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1043 200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 198 IPR027417 -
Amo05g1043 200 PANTHER RNA HELICASE 10 197 - -
Amo05g1043 200 Gene3D - 18 200 IPR027417 -
Amo05g1043 200 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 10 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1043 Amo-Chr5 13709808 13711734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1043 23 200 Eukaryotic Initiation Factors Gene Family AT3G19760 26.111 4.49e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1043 - K03257 gmx:100791017 273.863